Skip to main content
. 2016 Mar 18;6:23380. doi: 10.1038/srep23380

Table 1. Percent nucleotide and protein identity between FAV-002/H5N1 and top NCBI BLAST matches for eight gene segments.

Segment/Lineage % Nucleotide Identity similarity % Protein identity similarity
PB2/Eurasian A/gyrfalcon/Washington/41088-6/2014(H5N8) 2276/2280 (99%) A/gyrfalcon/Washington/41088-6/2014(H5N8) 758/759 (100%)
PB1/North American A/American green-winged teal/Washington/195750/2014(H5N1) 2270/2274 (99%) A/American green-winged teal/Washington/195750/2014(H5N1) 756/757 (99%)
PA/North American A/American green-winged teal/Washington/195750/2014(H5N1) 2147/2151 (99%) A/mallard/Alaska/44430-148/2008(H4N6) 715/716 (99%)
HA/Eurasian A/American green-winged teal/Washington/195750/2014(H5N1) 1700/1704 (99%) A/gyrfalcon/Washington/41088-6/2014(H5N8) 566/567 (99%)
NP/Eurasian A/American green-winged teal/Washington/195750/2014(H5N1) 1496/1497 (99%) A/American green-winged teal/Washington/195750/2014(H5N1) 498/498 (100%)
NA/North American A/American green-winged teal/Washington/195750/2014(H5N1) 1312/1314 (99%)* A/American green-winged teal/Washington/195750/2014(H5N1) 463/485 (96%)
M/ Eurasian A/American green-winged teal/Washington/195750/2014(H5N1) 987/987 (100%) A/American green-winged teal/Washington/195750/2014(H5N1) M1 - 97/97 (100%) & M2 - 252/252 (100%)
NS/North American A/American green-winged teal/Washington/195750/2014(H5N1) 850/850 (100%) A/American green-winged teal/Washington/195750/2014(H5N1) NS2 - 121/121 (100%); NS1 - 230/230 (100%)

*Excluding the 57 nucleotide deletion in the stalk region.