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. 2015 Sep 22;10(4):858–870. doi: 10.1038/ismej.2015.162

Table 1. AMD sample information.

Date Location pH Temperature Type Platform Seq. Data LII Spacers LII Groups LIII Spacers LIII Groups
Mar 2002 5way 0.83 42.0 °C MG PCR Sanger 454 136 MB 52 MB 389991 3516 157 91
Jun 2005 A Drift (UBA) 1.1 41.0 °C MG Sanger 114 MB 1871 277 237 187
Jul 2005 A Drift (UBA) 1.23 38.0 °C PCR 454 13 MB 59764 716 n/a n/a
Nov 2005 A Drift (UBA) 1.50 38.0 °C MG Sanger 106 MB 41 41 48 44
Jun 2006 C Drift (C75) 0.70 43.0 °C MG 454 80 MB 143 75 0 0
Aug 2006 C Drift (C75) 1.00 43.0 °C MG 454 88 MB 79 61 0 0
Nov 2006 C Drift (C75) 1.18 42.7 °C MG 454 90 MB 261 115 8 8
May 2007 C Drift (C75) 1.17 44.4 °C MG 454 96 MB 304 100 7 7
Aug 2007 C Drift (C75) 1.12 40.2 °C MG 454 95 MB 232 99 0 0

Abbreviations: AMD, acid mine drainage; n/a, not applicable. Sampling conditions, sequencing information and the number of CRISPR spacers and CRISPR spacer groups recovered from Leptospirillum groups II (LII) and III (LIII) for each AMD biofilm collected for this study. Each line represents a separate sample. ‘Type' refers to the source of the sequencing, either metagenomic dataset (MG) or CRISPR amplicon dataset (PCR). In certain cases, spacers and spacer groups may be shared across multiple samples.