. 2016 Mar 21;7:341. doi: 10.3389/fpls.2016.00341

Table 2.

List of genes present in Ampelopsis chloroplast genome.

Category	Gene group	Gene name
Self-replication	Ribosomal RNA genes	rrn4.5^a	rrn5^a	rrn16^a	rrn23^a
	Transfer RNA genes	trnA-UGC^a,b	trnC-GCA	trnD-GUC	trnE-UUC	trnF-GAA
		trnfM-CAU	trnG-GCC	trnG-UCC^b	trnH-GUG	trnI-CAU^a
		trnI-GAU^a,b	trnK-UUU^b	trnL-CAA^a	trnL-UAA^b	trnL-UAG
		trnM-CAU	trnN-GUU^a	trnP-UGG	trnQ-UUG	trnR-ACG^a
		trnR-UCU	trnS-GCU	trnS-GGA	trnS-UGA	trnT-GGU
		trnT-UGU	trnV-GAC^a	trnV-GAU	trnV-UAC^b	trnW-CCA
		trnY-GUA
	Small subunit of ribosome	rps2	rps3	rps4	rps7^a	rps8
		rps11	rps12^a,c,d	rps14	rps15	rps16^b
		rps18	rps19
	Large subunit of ribosome	rpl2^a	rpl14	rpl16^b	rpl20	rpl22
		rpl23	rpl32	rpl33	rpl36
	DNA-dependent RNA polymerase	rpoA	rpoB	rpoC1^b	rpoC2
	Translational initiation factor	infA
Genes for photosynthesis	Subunits of photosystem I	psaA	psaB	psaC	psaI	psaJ
		ycf3^c	ycf4
	Subunits of photosystem II	psbA	psbB	psbC	psbD	psbE
		psbF	psbH	psbI	psbJ	psbK
		psbL	psbM	psbN	psbT	psbZ
	Subunits of cytochrome	petA	petB^b	petD^b	petG	petL
		petN
	Subunits of ATP synthase	atpA	atpB	atpE	atpF^b	atpH
		atpI
	Large subunit of Rubisco	rbcL
	Subunits of NADH dehydrogenase	ndhA^b	ndhB^a,b	ndhC	ndhD	ndhE
		ndhF	ndhG	ndhH	ndhI	ndhJ
		ndhK
Other genes	Maturase	matK
	Envelope membrane protein	cemA
	Subunit of acetyl-CoA	accD
	C-type cytochrome synthesis gene	ccsA
	Protease	clpP^c
	Component of TIC complex	ycf1^a

^aTwo gene copies in IRs; ^bgene containing a single intron; ^cgene containing two introns; ^dgene divided into two independent transcription units.