Table 2. Thermodynamic parameters of quadruplex (Q) and i-motif (i) formationa.
Sequence | −ΔH° (kcal/mol) | −ΔS° (eu) | ΔG°37 (kcal/mol) | TM (°C) |
---|---|---|---|---|
CCCUCCCUUUUCCCUCCCi | 33.6±3.7 | 109.9±12.1 | +0.46±0.21 | 32.8 |
CCCUCCCUUUUCCCUCCCi | 35.2±2.9 | 115.1±9.3 | +0.46±0.26 | 33.0 |
AGGAGGAGGAGGAQ | 87.3±11.3 | 233.4±32.8 | −14.88±1.13 | 73.6 |
AGGAGGAGGAGGAQ | 96.4±2.3 | 260.2±6.8 | −15.71±0.21 | 73.0 |
a–solution: 100 mM KCl, 20mM sodium cacodylate, 0.5mM EDTANa2, pH 7.0 (quadruplex) or 3.4 (i-motif),
italics– β-L-RNA.