Table 1.
Modified nucleosides that are presented in detail in this work; for a complete list of the modified nucleosides in the force field see Supporting Information.
| Symbola | Codeb | Common name |
|---|---|---|
| Am | OMA | 2′‐O‐methyladenosine |
| m6A | 6MA | N6‐methyladenosine |
| Cm | OMC | 2′‐O‐methylcytidine |
| ac4C | 4AC | N4‐acetylcytidine |
| ac4Cm | MAC | N4‐acetyl‐2′‐O‐methylcytidine |
| m4C | 4MC | N4‐methylcytidine |
| k2C | K2C | Lysidine |
| Gm | OMG | 2′‐O‐methylguanosine |
| m2G | 2MG | N2‐methylguanosine |
| m7G | 7MG | 7‐Methylguanosine |
| Um | OMU | 2′‐O‐methyluridine |
| Ψ | PSU | Pseudouridine |
| D | H2U | Dihydrouridine |
a
Symbols conventionally used in the literature.
b
The three‐letter code used in the force field files, and figure legends.