Table 3. Microarray samples used for gene expression correlations of metabolic genes.

GSE number	Experimental conditions	Number of sample used	Reference
GSE3201	Exponential growth phase	38	Gao et al.53
GSE6209	Human macrophage infection	11	Fontan et al.57
GSE8786	Stationary phase and low oxygen dormancy	54	Voskuil et al.54
GSE8827	Macrophage intracellular cue	8	Rohde et al.56
GSE9331	Hypoxic condition	52	Rustad et al.32
GSE10391	Multiple stress conditions	75	Deb et al.33
GSE11095	Carbon monoxide treatment	6	Shiloh et al.55
GSE11096	dosR and dosS mutants CO sensing	34	Shiloh et al.55
GSE14005	With lung surfactant	8	Schwab et al.59
GSE14840	Phosphate depletion	6	Rifat et al.34
GSE16146	Reactive oxygen and nitrogen	80	Voskuil and Visconti, 2009 (un-published)
GSE21114	In vitro and inside macrophage	116	Homolka et al.58
GSE21590	Reaeration timecourse from a defined hypoxia model	33	Sherrid et al.60