TABLE I. Primers sequence, thermal cycling profile, and size of amplified polymerase chain reaction (PCR) fragment in each PCR reaction in the detection of genes of Staphylococcus epidermidisresistant to erythromycina .
Gene | Primers sequence | PCR conditions | PCR fragment size (bp) |
---|---|---|---|
ermA | 5’-TCTAAAAAGCATGTAAAAGAA-3’ 5’-CTTCGATAGTTTATTAATATTAGT-3’ | 35 (30 s at 94ºC, 1 min at 48ºC, 2 min at 72ºC) | 645 |
ermB | 5’-GAAAAGGTACTCAACCAAATA-3’ 5’-AGTAACGGTACTTAAATTGTTTAC-3’ | 35 (30 s at 94ºC, 30 s at 50ºC, 2 min at 72ºC) | 639 |
ermC | 5’-AGTACAGAGGTGTAATTTCG-3’ 5’-AATTCCTGCATGTTTTAAGG-3’ | 35 (55 s at 94ºC, 1 min at 53ºC, 1 min at 72ºC) | 642 |
msrA | 5’-GGCACAATAAGAGTGTTTAAAGG-3’ 5’-AAGTTATATCATGAATAGATTGTCCTGTT-3’ | 25 (1 min at 94ºC, 1 min at 50ºC, 90 s at 72ºC) | 399 |
mphC | 5’-GAGACTACCAGACCTGACG-3’ 5’-CATACGCCGATTCTCCTGAT-3’ | 35 (1 min at 94ºC, 1 min at 59ºC, 1 min at 72ºC) | 530 |
linA/A’ | 5’-GGTGGCTGGGGGGTAGATGTATTAACTGG-3’ 5’-GCTTCTTTTGAAATACATGGTATTTTTCGATC-3’ | 30 (30 s at 94ºC, 30 s at 57ºC, 1 min at 72ºC) | 323 |
a: Sutcliffe et al. (1996) and Lina et al. (1999).