Skip to main content
. Author manuscript; available in PMC: 2016 Aug 11.
Published in final edited form as: J Chem Theory Comput. 2015 Aug 11;11(8):3714–3728. doi: 10.1021/acs.jctc.5b00271

Figure 2.

Figure 2

Structural overlap and BB-RMSD between representative structures of the most populated clusters from GB-neck2 (blue) and explicit water (red) MD simulations. Only backbones of DNA are shown in the DNA/protein 1GCC complex for clarity.