Table 2. Bangladesh low-pathogenic avian influenza viruses isolated by subtype, location within Bangladesh, collection date, accession numbers in GISAID and type of sampling.
Strain name | Subtype | Location of collection | Date of collection | Acc. no. | Type of sampling |
---|---|---|---|---|---|
A/duck/Bangladesh/1687/2010 | H1N1 | Rajshahi | 16 Jul 2010 | EPI540224-31 | LBM |
A/duck/Bangladesh/31687/2010 | H1N1 | Chittagong | 11 Jul 2010 | EPI540248-55 | LBM |
A/duck/Bangladesh/1592/2010 | H1N1 | Netrokona | 20 Jan 2010 | EPI540240-47 | LBM |
A/duck/Bangladesh/1352/2009 | H1N1 | Sunamgon | 28 Jan 2009 | EPI540232-39 | LBM |
A/duck/Bangladesh/1584/2010 | H1N3 | Netrokona | 20 Jan2010 | EPI540256-63 | LBM |
A/duck/Bangladesh/727/2011 | H2N4 | Sylhet | 3 Apr 2011 | EPI484579-80, EPI540527-32 | DD |
A/duck/Bangladesh/814/2011 | H2N4 | Sylhet | 3 Apr 2011 | EPI484576-77, EPI540533-38 | DD |
A/duck/Bangladesh/983/2011 | H2N4 | Sylhet | 3 Apr 2011 | EPI484574-75, EPI540539-44 | DD |
A/duck/Bangladesh/1822/2011 | H3N2 | Netrokona | 19 Jan 2011 | EPI540272-78 | LBM |
A/duck/Bangladesh/1025/2011 | H3N2 | Dinajpur | 21 Feb 2011 | EPI540280-87 | LBM |
A/duck/Bangladesh/1772/2010 | H3N2 | Rajshahi | 12 Nov 2010 | EPI540264-71 | LBM |
A/duck/Bangladesh/1798/2010 | H3N6 | Netrokona | 10 Nov 2010 | EPI540288-95 | LBM |
A/duck/Bangladesh/1800/2010 | H3N6 | Netrokona | 10 Nov 2010 | EPI540296-303 | LBM |
A/duck/Bangladesh/1574/2009 | H3N8 | Netrokona | 23 Dec 2009 | EPI540304-11 | LBM |
A/duck/Bangladesh/1575/2009 | H3N8 | Netrokona | 23 Dec 2009 | EPI540320-27 | LBM |
A/duck/Bangladesh/1576/2009 | H3N8 | Netrokona | 23 Dec 2009 | EPI540312-19 | LBM |
A/duck/Bangladesh/1745/2010 | H4N2 | Chittagong | 17 Oct 2010 | EPI540328-35 | LBM |
A/duck/Bangladesh/1746/2010 | H4N2 | Chittagong | 17 Oct 2010 | EPI540336-43 | LBM |
A/duck/Bangladesh/1766/2010 | H4N6 | Netrokona | 27 Oct 2010 | EPI540352-59 | LBM |
A/duck/Bangladesh/1521/2009 | H4N6 | Netrokona | 21 Oct 2009 | EPI540360-67 | LBM |
A/duck/Bangladesh/1283/2008 | H4N6 | Chittagong | 21 Dec 2008 | EPI540368-75 | LBM |
A/duck/Bangladesh/1783/2010 | H4N6 | Netrokona | 10 Nov 2010 | EPI540344-51 | LBM |
A/duck/Bangladesh/1784/2010 | H4N6 | Netrokona | 10 Nov 2010 | EPI540376-83 | LBM |
A/duck/Bangladesh/1559/2009 | H5N2 | Rajshahi | 18 Dec 2009 | EPI540384-91 | LBM |
A/duck/Bangladesh/1293/2008 | H6N1 | Rajshahi | 21 Nov 2008 | EPI540392-99 | LBM |
A/waterfowl/Bangladesh/12301/2013 | H6N7 | Netrokona | 23 Jan 2013 | EPI540400-407 | LBM |
A/environment/Bangladesh/1008/2010 | H7N9 | Dhaka | 23 Sep 2010 | EPI540408-15 | LBM |
A/environment/Bangladesh/917/2012 | H7N9 | Dhaka | 14 Mar 2012 | EPI540416-23 | LBM |
A/environment/Bangladesh/100/2010 | H9N2 | Dhaka | 25 May 2010 | EPI448280-87 | LBM |
A/environment/Bangladesh/124/2010 | H9N2 | Dhaka | 19 Jul 2010 | EPI540424-31 | LBM |
A/environment/Bangladesh/155/2010 | H9N2 | Dhaka | 20 Oct 2010 | EPI540432-39 | LBM |
A/environment/Bangladesh/177/2010 | H9N2 | Chittagong | 12 Dec 2010 | EPI540440-47 | LBM |
A/duck/Bangladesh/1009/2009 | H9N2 | Gaibanda^ | 5 Mar 2009 | EPI457484-91 | LBM |
A/avian/Bangladesh/91254/2012 | H9N2 | Dhaka | 19 Nov 2012 | EPI540480-87 | OI |
A/avian/Bangladesh/91256/2012 | H9N2 | Dhaka | 19 Nov 2012 | EPI540464-71 | OI |
A/avian/Bangladesh/91277/2012 | H9N2 | Dhaka | 20 Nov 2012 | EPI540472-79 | OI |
A/avian/Bangladesh/91286/2012 | H9N2 | Dhaka | 29 Nov 2012 | EPI540488-95 | OI |
A/poultry/Bangladesh/91349/2012 | H9N2 | Dhaka | 15 Dec 2012 | EPI540456-63 | OI |
A/poultry/Bangladesh/91354/2012* | H9N2 | Dhaka | 15 Dec 2012 | EPI540496-503 | OI |
A/poultry/Bangladesh/91311/2012 | H9N2 | Dhaka | 15 Dec 2012 | EPI540448-55 | OI |
A/duck/Bangladesh/1727/2010 | H11N3 | Natore | 17 Sep 2010 | EPI540168-75 | LBM |
A/duck/Bangladesh/1728/2010 | H11N3 | Natore | 17 Sep 2010 | EPI540176-83 | LBM |
A/duck/Bangladesh/1729/2010 | H11N3 | Natore | 17 Sep 2010 | EPI540184-91 | LBM |
A/duck/Bangladesh/1753/2010 | H11N3 | Netrokona | 15 Sep 2010 | EPI540192-99 | LBM |
A/duck/Bangladesh/1595/2010 | H11N3 | Netrokona | 20 Jan 2010 | EPI540152-59 | LBM |
A/duck/Bangladesh/1578/2009 | H11N3 | Netrokona | 23 Dec 2009 | EPI540160-67 | LBM |
A/duck/Bangladesh/1051/2007 | H11N3 | Netrokona | 31 Oct 2007 | EPI540208-15 | LBM |
A/duck/Bangladesh/1052/2007 | H11N3 | Netrokona | 31 Oct 2007 | EPI540216-23 | LBM |
A/environment/Bangladesh/1002/2010 | H11N3 | Chittagong | 14 Mar 2010 | EPI540200-207 | LBM |
*NP gene sequence not available
^Backyard poultry, DD = domestic duck grazing with wild birds, LBM = live bird market surveillance, OI = outbreak investigation