Table 4. 45 genes specific in P. mirabilis C02011.
| Scaffold | Start | End | Strand | gene_id | Annotated protein |
|---|---|---|---|---|---|
| fa_scaffold3 | 465840 | 465962 | + | C02011GL001038 | |
| fa_scaffold3 | 465952 | 466815 | + | C02011GL001039 | |
| fa_scaffold3 | 466833 | 467849 | + | C02011GL001040 | Putative phage gene |
| fa_scaffold3 | 467846 | 468379 | + | C02011GL001041 | |
| fa_scaffold3 | 468467 | 468952 | + | C02011GL001042 | Putative phage gene |
| fa_scaffold3 | 468949 | 469179 | + | C02011GL001043 | |
| fa_scaffold3 | 469224 | 471878 | + | C02011GL001044 | Putative inner membrane protein |
| fa_scaffold3 | 472166 | 472393 | + | C02011GL001045 | Putative phage gene |
| fa_scaffold3 | 472383 | 472538 | + | C02011GL001046 | |
| fa_scaffold3 | 473119 | 473679 | + | C02011GL001047 | |
| fa_scaffold3 | 473682 | 475016 | + | C02011GL001048 | Retro-type reverse transcriptase |
| fa_scaffold3 | 1068445 | 1069563 | - | C02011GL001596 | |
| fa_scaffold3 | 1069568 | 1070161 | - | C02011GL001597 | |
| fa_scaffold3 | 1535544 | 1536122 | - | C02011GL002036 | |
| fa_scaffold3 | 1536545 | 1537150 | + | C02011GL002037 | Integrase |
| fa_scaffold3 | 1538064 | 1538282 | + | C02011GL002039 | |
| fa_scaffold3 | 1538847 | 1539260 | - | C02011GL002041 | |
| fa_scaffold3 | 1543281 | 1543748 | - | C02011GL002049 | |
| fa_scaffold3 | 1543975 | 1544586 | - | C02011GL002050 | |
| fa_scaffold3 | 1544614 | 1545003 | - | C02011GL002051 | |
| fa_scaffold3 | 1809941 | 1810177 | - | C02011GL002280 | |
| fa_scaffold3 | 1810202 | 1810420 | - | C02011GL002281 | |
| fa_scaffold3 | 1810632 | 1811384 | - | C02011GL002282 | Putative phage regulatory protein |
| fa_scaffold3 | 1811504 | 1812076 | - | C02011GL002283 | BRO family protein |
| fa_scaffold3 | 1812403 | 1813122 | + | C02011GL002284 | |
| fa_scaffold3 | 1823562 | 1824128 | - | C02011GL002300 | Putative phage terminase |
| fa_scaffold3 | 1824196 | 1824423 | + | C02011GL002301 | |
| fa_scaffold3 | 1824634 | 1824879 | - | C02011GL002302 | |
| fa_scaffold3 | 1825050 | 1825649 | - | C02011GL002303 | KilA-N domain-containing protein |
| fa_scaffold6 | 547377 | 548129 | - | C02011GL003316 | MobC |
| fa_scaffold6 | 548138 | 549889 | - | C02011GL003317 | MobB |
| fa_scaffold6 | 549859 | 550503 | - | C02011GL003318 | |
| fa_scaffold6 | 550993 | 551298 | - | C02011GL003319 | ORF15 |
| fa_scaffold6 | 551334 | 551708 | - | C02011GL003320 | |
| fa_scaffold6 | 551729 | 552754 | - | C02011GL003321 | T4SS virB11 |
| fa_scaffold6 | 552744 | 554012 | - | C02011GL003322 | T4SS virB10 |
| fa_scaffold6 | 554056 | 554961 | - | C02011GL003323 | T4SS virB9 |
| fa_scaffold6 | 554961 | 555644 | - | C02011GL003324 | T4SS virB8 |
| fa_scaffold6 | 555866 | 556936 | - | C02011GL003325 | T4SS virB6 |
| fa_scaffold6 | 557184 | 557885 | - | C02011GL003326 | T4SS virB5 |
| fa_scaffold6 | 557903 | 560641 | - | C02011GL003327 | T4SS virB4 |
| fa_scaffold6 | 560654 | 560833 | - | C02011GL003328 | T4SS virB2 |
| fa_scaffold6 | 560947 | 561699 | - | C02011GL003329 | T4SS virB1 |
| fa_scaffold6 | 562549 | 563136 | - | C02011GL003330 | |
| fa_scaffold6 | 590486 | 591754 | - | C02011GL003343 | Integrase |
The three large genomic islands are highlighted by a bold font in the column “gene_id”. The gene annotations are summarized from the S1 Table.