Table 2. Nucleotide alignment identities of AVE001 amplicons from the screening of Rhesus Macaque Study 1.
Top half: pairwise nucleotide identity. Bottom half: number of mismatched nucleotides.
| Location | Time Point | Specimen | 265–06 | 141–07 | 135–07 | 141–07 | 147–07 | 265–06 | 91–05 | 86–05 | 294–06 | 288–06 | 148–07 | IE43 | IE47 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NEPRC | 64 | 265–06 | 0.99 | 0.97 | 0.98 | 0.98 | 0.98 | 0.97 | 0.97 | 0.98 | 0.98 | 0.98 | 0.84 | 0.84 | |
| NEPRC | 64 | 141–07 | 6 | 0.97 | 0.97 | 0.97 | 0.97 | 0.97 | 0.96 | 0.97 | 0.97 | 0.97 | 0.84 | 0.84 | |
| NEPRC | 24 | 135–07 | 12 | 16 | 0.98 | 0.98 | 0.97 | 0.98 | 0.97 | 0.98 | 0.97 | 0.97 | 0.84 | 0.85 | |
| NEPRC | 24 | 141–07 | 10 | 14 | 11 | 0.99 | 0.98 | 0.99 | 0.97 | 0.99 | 0.99 | 0.99 | 0.85 | 0.85 | |
| NEPRC | 24 | 147–07 | 10 | 14 | 11 | 6 | 0.98 | 0.99 | 0.97 | 0.99 | 0.99 | 0.99 | 0.84 | 0.85 | |
| NEPRC | 24 | 265–06 | 10 | 14 | 13 | 8 | 8 | 0.97 | 0.96 | 0.98 | 1.00 | 1.00 | 0.84 | 0.84 | |
| NEPRC | 24 | 91–05 | 12 | 14 | 11 | 6 | 6 | 12 | 0.96 | 0.99 | 0.98 | 0.98 | 0.84 | 0.85 | |
| NEPRC | 24 | 86–05 | 15 | 17 | 14 | 15 | 15 | 17 | 17 | 0.97 | 0.97 | 0.97 | 0.86 | 0.86 | |
| NEPRC | 24 | 294–06 | 11 | 15 | 8 | 5 | 5 | 11 | 3 | 14 | 0.98 | 0.98 | 0.84 | 0.85 | |
| NEPRC | 24 | 288–06 | 9 | 13 | 12 | 7 | 7 | 1 | 11 | 16 | 10 | 1.00 | 0.84 | 0.85 | |
| NEPRC | 24 | 148–07 | 9 | 13 | 12 | 7 | 7 | 1 | 11 | 16 | 10 | 0 | 0.84 | 0.85 | |
| TNPRC | NA | IE43 | 77 | 78 | 76 | 72 | 76 | 77 | 75 | 67 | 75 | 76 | 76 | 1.00 | |
| TNPRC | NA | IE47 | 75 | 76 | 74 | 70 | 74 | 75 | 73 | 65 | 73 | 74 | 74 | 2 |