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. 2016 Mar 15;7(2):e00235-16. doi: 10.1128/mBio.00235-16

FIG 1 .

FIG 1 

Neighbor-joining tree of Euclidean distances between clinical isolates (CIs) sequenced directly from HAE supernatant fluids. In the nomenclature format shown, “CI-11-D3,” for example, represents CI-11 at day 3 of collection. Distances between genomes were calculated based on the relative frequencies of alleles at each position that was covered by at least 10 reads