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. 2016 Mar 15;7(2):e00235-16. doi: 10.1128/mBio.00235-16

TABLE 3 .

Positively selected sites in each ORF as determined by the Bayes empirical Bayes, SLAC, and FEL methods

ORF Positively selected site(s) by:
PAML (P <
0.05)a
SLAC (P <
0.1)
FEL (P <
0.1)
N None None None
P 178, 258,
279, 328
None 279, 584
C 173 None None
M None None None
F 17 None None
HN 138 None None
L None None 2223
a

Bayes empirical Bayes method implemented in PAML.