Table 5. Location of SNPs with significant association at a false discovery rate of 10% for expansion volume, 100-kernel weight, or kernel density, in popcorn populations, and the candidate genes.
| Trait | Population | Chr. | Position (bp) | SNP | Candidate gene |
|---|---|---|---|---|---|
| Expansion volume | Viçosa S4 | 1 | 168429768 | PZE-101131166 | GRMZM2G018472 |
| 6 | 147905068 | SYN4651 | GRMZM2G058472 | ||
| 8 | 173931575 | PZE-108134983 | GRMZM2G118462 | ||
| 100-kernel weight | Beija-Flor c4 | 1 | 168256682 | PZE-101131103 | GRMZM2G018472 |
| Viçosa c4 | 7 | 125723685 | PZE-107083429 | GRMZM2G133613 | |
| Kernel density | Viçosa c4 | 1 | 2208377 | SYN6001 | GRMZM2G109725 |
| 3 | 15222626 | SYN33443 | GRMZM2G334628 | ||
| 4 | 41873008 | PZE-104033459 | GRMZM2G138060 | ||
| 8 | 173973257 | SYN20806 | GRMZM2G118462 | ||
| UFV MP-1 | 1 | 8510819 | SYN11901 | GRMZM2G009014 | |
| 10 | 11184622 | PZE-110012671 | GRMZM2G392513 | ||
| 10 | 114892724 | PZE-110060686 | GRMZM2G049681 |