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. 2016 Mar 21;82(7):1992–2002. doi: 10.1128/AEM.03584-15

TABLE 1.

Primers for cloning and site-directed mutagenesisa

Gene target or primer name Restriction enzyme site Primer sequence (5′ to 3′)
Primers for cloning
    dzr BamHI ATAAGGATCCGATGCAGCACGCGAAATA
NotI ATATAGCGGCCGCTACACCATGCGCGCTAC
    ifcA NdeI ATAATCATATGAAAGCTCAACTGAATC
EcoRV ATAAGATATCCTAGTGGTGATGATGGTGATGCTCAGCGTCCACGTC
    ddr BamHI ATAAGGATCCGATGGCACAAGAGGTTAAG
NotI ATATAGCGGCCGCTTAGGCGATTTCGCCCTG
    tdr NdeI ATAATCATATGGCAGAATTCGACGTTG
KpnI ATAAGGTACCTCAGTGGTGGTGGTGGTGGTGCATGTTTGCAATCGCGTG
Primers for site-directed mutagenesis of DHDR
    P212A_F CCGTGACCGCCGGCCTGGTGTG
    P212A_B CCAGGCCGGCGGTCACGGAATTG
    H182Y_F CAGGCATGCTACGCCGCCGCCAAG
    H182Y_B GGCGGCGGCGTAGCATGCCTGCGG
a

dzr and ifcA were cloned into the pRSFDuet-1 vector at multicloning sites 1 and 2, respectively. ddr and tdr were cloned into the pCDFDuet-1 vector at multicloning sites 1 and 2, respectively. dzr and ddr had an N-terminal 6×His tag sequence that was originally positioned in the plasmids, whereas ifcA and tdr had a C-terminal 6×His tag sequence followed by a stop codon. In the case of sole cloning of ifcA, the pET24a vector was used, and the C-terminal cloning primer was modified by replacing the EcoRV restriction site with a HindIII restriction site. All genes were expressed under the control of the T7 promoter.