TABLE 1.
Gene target or primer name | Restriction enzyme site | Primer sequence (5′ to 3′) |
---|---|---|
Primers for cloning | ||
dzr | BamHI | ATAAGGATCCGATGCAGCACGCGAAATA |
NotI | ATATAGCGGCCGCTACACCATGCGCGCTAC | |
ifcA | NdeI | ATAATCATATGAAAGCTCAACTGAATC |
EcoRV | ATAAGATATCCTAGTGGTGATGATGGTGATGCTCAGCGTCCACGTC | |
ddr | BamHI | ATAAGGATCCGATGGCACAAGAGGTTAAG |
NotI | ATATAGCGGCCGCTTAGGCGATTTCGCCCTG | |
tdr | NdeI | ATAATCATATGGCAGAATTCGACGTTG |
KpnI | ATAAGGTACCTCAGTGGTGGTGGTGGTGGTGCATGTTTGCAATCGCGTG | |
Primers for site-directed mutagenesis of DHDR | ||
P212A_F | CCGTGACCGCCGGCCTGGTGTG | |
P212A_B | CCAGGCCGGCGGTCACGGAATTG | |
H182Y_F | CAGGCATGCTACGCCGCCGCCAAG | |
H182Y_B | GGCGGCGGCGTAGCATGCCTGCGG |
dzr and ifcA were cloned into the pRSFDuet-1 vector at multicloning sites 1 and 2, respectively. ddr and tdr were cloned into the pCDFDuet-1 vector at multicloning sites 1 and 2, respectively. dzr and ddr had an N-terminal 6×His tag sequence that was originally positioned in the plasmids, whereas ifcA and tdr had a C-terminal 6×His tag sequence followed by a stop codon. In the case of sole cloning of ifcA, the pET24a vector was used, and the C-terminal cloning primer was modified by replacing the EcoRV restriction site with a HindIII restriction site. All genes were expressed under the control of the T7 promoter.