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. 2016 Mar 25;60(4):2359–2365. doi: 10.1128/AAC.03020-15

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Copyright © 2016 Baines et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

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FIG 1 — Sequence comparison of all complete genomes of clonal complex 5 (CC5) S. aureus strains. A BLAST-based comparison of all complete CC5 S. aureus genomes against representative FA-resistant strain NZAK3, visualized with BRIG, illustrates a high level of sequence conservation among members of the CC5 lineage. Genomic regions in NZAK3 that were variably present in other CC5 S. aureus strains include the SCCmec-fus II mobile element, a chromosomal copy of the blaRZ locus, and two complete phage regions, which were identified using PHAST as a presumptive phiETA2 (NC_008798) and phiN315 (NC_004740).