Table 3.
The sequence variation information of functional gene by 6% MAF.
| Name | Length | Assembled reads | Nonassembled reads | Pretrimmed reads | Original reads | ||||
|---|---|---|---|---|---|---|---|---|---|
| Number | Ratio | Number | Ratio | Number | Ratio | Number | Ratio | ||
| ABA8OH | 654 | 5 | 0.76% | 19 | 2.91% | 13 | 1.99% | 20 | 3.06% |
| ABI5 | 1540 | 159 | 10.32% | 171 | 11.10% | 145 | 9.42% | 152 | 9.87% |
| ACC1 | 1131 | 10 | 0.88% | 14 | 1.24% | 10 | 0.88% | 16 | 1.41% |
| APX | 1354 | 97 | 7.16% | 86 | 6.35% | 83 | 6.13% | 96 | 7.09% |
| DRF | 963 | 42 | 4.36% | 39 | 4.05% | 41 | 4.26% | 46 | 4.78% |
| EMH5 | 443 | 21 | 4.74% | 29 | 6.55% | 20 | 4.51% | 27 | 6.09% |
| ERD4 | 810 | 46 | 5.68% | 44 | 5.43% | 42 | 5.19% | 45 | 5.56% |
| FUC3 | 564 | 18 | 3.19% | 13 | 2.30% | 20 | 3.55% | 22 | 3.90% |
| GSK | 527 | 9 | 1.71% | 9 | 1.71% | 15 | 2.85% | 20 | 3.80% |
| HKT8 | 866 | 51 | 5.89% | 36 | 4.16% | 44 | 5.08% | 56 | 6.47% |
| LEA1 | 816 | 14 | 1.72% | 44 | 5.39% | 44 | 5.39% | 61 | 7.48% |
| LEC1 | 910 | 92 | 10.11% | 90 | 9.89% | 83 | 9.12% | 110 | 12.09% |
| PhyC | 934 | 19 | 2.03% | 30 | 3.21% | 31 | 3.32% | 36 | 4.07% |
| Q | 809 | 4 | 0.49% | 28 | 3.46% | 25 | 3.09% | 35 | 4.20% |
| WDAI | 446 | 44 | 9.87% | 47 | 10.54% | 38 | 8.52% | 34 | 7.62% |
| ZCCT1 | 669 | 28 | 4.19% | 34 | 5.08% | 21 | 3.14% | 28 | 4.19% |