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. 2016 Mar 16;283(1826):20153069. doi: 10.1098/rspb.2015.3069

Table 2.

Flavobacterium columnare strains used in this study. The strains were isolated from nature, from river upstream of a fish farm (inlet water) in Central Finland (farm B in table 1) and from the outlet water or from the river immediately downstream of the outlet water tube of the same farm in summer 2010. Genetic grouping is based on automated ribosomal intergenic spacer analysis (ARISA).

isolate inlet water outlet water genetic group time of isolation (2010) references
B395 Xa G 21st June [30]
B396 Xa A 21st June [30]
B397 Xb C 21st June [30]
B398 Xb A 21st June [30]
B400 Xb A 19th July [30]
B404 Xa C 2nd August [30]
B355 X A 2nd August this study
B406 Xb C 16th August [30]
B407 Xb,c G 16th August [30]
B339 Xd C 5th July this study
B340 Xd C 5th July this study
B350 Xa E 2nd August this study
B351 Xa E 2nd August this study
B366 Xd C 2nd August this study
B370 Xb E 16th August this study
B374 Xb E 16th August this study
B375 Xb E 16th August this study
B379 Xd E 30th August this study

aRiver, biofilm.

bRiver, free water.

c400 m upstream of the water intake.

dOutlet water of the farm.