Table 7.
Scoring metrics using an independent test dataset.
| Methods | Residue = S | ||
|---|---|---|---|
| Sen (%) | Sp (%) | MCC | |
| NetPhosK | 80.13 | 38.79 | 0.10 |
| GPS 2.1 | 94.79 | 28.62 | 0.14 |
| NetPhos | 76.55 | 54.20 | 0.16 |
| PHOSFER | 74.59 | 65.51 | 0.22 |
| Musite | 55.70 | 87.39 | 0.31 |
| PhosphoSVM | 63.84 | 81.76 | 0.29 |
| RF-Phos | 72.00 | 70.00 | 0.41 |
|
| |||
| Methods | Residue = T | ||
| Sen (%) | Sp (%) | MCC | |
|
| |||
| NetPhosK | 69.12 | 50.82 | 0.06 |
| GPS 2.1 | 95.59 | 20.84 | 0.07 |
| NetPhos | 54.41 | 77.43 | 0.12 |
| PHOSFER | 77.94 | 64.77 | 0.14 |
| Musite | 48.53 | 93.55 | 0.26 |
| PhosphoSVM | 70.59 | 78.16 | 0.19 |
| RF-Phos | 79.00 | 80.00 | 0.50 |
|
| |||
| Methods | Residue = Y | ||
| Sen (%) | Sp (%) | MCC | |
|
| |||
| NetPhosK | 25.49 | 83.23 | 0.04 |
| GPS 2.1 | 98.04 | 21.42 | 0.09 |
| NetPhos | 64.71 | 67.50 | 0.13 |
| PHOSFER | 62.75 | 59.29 | 0.08 |
| Musite | 47.06 | 88.77 | 0.20 |
| PhosphoSVM | 82.35 | 64.18 | 0.18 |
| RF-Phos | 61.00 | 62.00 | 0.29 |