Table 3. List of Wig-1-bound RNAs chosen for validation with information regarding their enrichment values in the RIP experiment shown as the log value of the fold-change (logFC) in both HCT116 and Saos2 cells, and the number of AUUUA pentamers found in the 3′UTRs by RSAT software.
Target | Description | LogFC HCT116 | LogFC Saos2 | AUUUA count |
---|---|---|---|---|
MAD2L1 | MAD2 mitotic arrest deficient-like 1 | 1.92 | 2.15 | 3 |
MTHFD2 | Methylenetetra-hydrofolate dehydrogenase (NADP+ dependent) 2 | 1.36 | 1.29 | 5 |
CCNG1 | Cyclin G1 | 2.59 | 2.14 | 3 |
EIF4E | Eukaryotic translation initiation factor 4E | 2.06 | 1.82 | 3 |
CHEK1 | Checkpoint kinase 1 | 1.8 | 1.4 | 2 |
RMI1 | RecQ mediated genome instability 1 | 2.43 | 1.89 | 9 |
HIF1A | Hypoxia inducible factor 1, alpha subunit | 2.03 | 1.57 | 7 |
AMD1 | Adenosylmethionine decarboxylase 1 | 2.16 | 2.17 | 6 |
CAV1 | Caveolin 1 | 1.55 | 1.56 | 3 |