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. 2016 Mar 29;11(3):e0152364. doi: 10.1371/journal.pone.0152364

Table 2. Laboratory test results of participants diagnosed with TB, by type of test and specimen type (n = 88)*.

Specimen ZN Result FM Result Xpert MTB/RIF Result MGIT Result
Negative n (%; 95% CI)§ Positive n (%; 95% CI)§ Negative n (%; 95% CI)§ Positive n (%; 95% CI)§ Negative n (%; 95% CI)§ Positive n (%; 95% CI)§ Negative n (%; 95% CI)§ Positive n (%; 95% CI)§ Contaminated n (%; 95% CI)§
Spot sputum 65 (77.6; 72.7–82.5) 19 (22.4; 17.5–27.32) 65 (74.8; 72.3–77.5) 22 (25.2; 22.5–27.8) 36 (43.0; 35.8–50.1) 48 (57.0; 49.9–64.2) 16 (18.3; 13.4–23.2) 65 (74.6; 69.3–79.9) 6 (7.1; 3.7–10.4)
Morning sputum 59 (69.5; 62.8–76.3) 26 (30.5; 23.7–37.2) 54 (63.7; 55.3–72.2) 31 (36.3; 27.8–44.7) 26 (34.0; 27.9–40.1) 50 (66.0; 59.9–72.1) 17 (20.0; 14.4–25.7) 59 (69.2; 61.4–77.0) 9 (10.7; 5.2–16.2)
Lymph node aspirate n/a n/a n/a n/a n/a n/a 0 5 (100, 100–100) 0
Stool n/a n/a 28 (84.8; 79.2–90.5) 5 (15.2; 9.5–20.8) n/a n/a 11 (33.3; 16.2–50.5) 11 (33.3; 9.5–57.1) 11 (33.3; 16.2–50.5)

* Of the 88 persons with TB, 84 submitted a spot sputum for ZN microscopy and Xpert MTB/RIF, 87 submitted a spot sputum for fluorescence microscopy and liquid culture, and 85 submitted a morning sputum for all tests; 9 of the morning specimens that were submitted by TB cases were not tested by Xpert MTB/RIF because of limited volume.

ZN = Ziehl-Neelsen microscopy; FM = Fluorescent Microscopy; Xpert MTB/RIF = GeneXpert MTB/RIF assay; MGIT = Mycobacterial Growth Indicator Tube

Negative MGIT also includes non-tuberculous mycobacteria, which was identified on one spot 1 specimen.

§ Percentages are weighted, and do not equal the proportion based on unweighted counts; 95% CI = 95% confidence interval