Table 2.
Overview of number of ROHs, average length of ROHs, and nucleotide diversity outside ROHs for all Sus cebifrons individuals and other Sus individuals. Description of other Sus species is in Supplementary Material, Table S1. Asian wild boars 1 and 2 originate from north China and south China, respectively. European wild boars 1 and 2 represent populations from Italy and France, respectively.
| Sample code or species name | Sex | Inbreeding coefficient (F) |
# ROHs (>20 bins) |
Average length of ROHs (kb) |
Nucleotide diversity outside ROHs (π) |
|---|---|---|---|---|---|
| 02M01 | M | 0 | 34 | 761.43 | 12.5 |
| 02M02 | M | 0 | 75 | 1764.21 | 12.1 |
| 01F01 | F | 0.1875 | 110 | 2245.32 | 11.9 |
| Kb16508 | M | 0.0625 | 132 | 1420.68 | 12.4 |
| Kb16637 | F | 0 | 144 | 1860.76 | 12.4 |
| Kb17528 | F | 0.25 | 193 | 2867.06 | 12.0 |
| Kb14130 | F | 0 | 130 | 2563.13 | 12.2 |
| Sus verrucosus | U | NA | 275 | 3829.13 | 6.3 |
| Sus barbatus | U | NA | 11 | 1551.82 | 26.4 |
| Sus celebensis | U | NA | 36 | 2719.72 | 23.2 |
| Asian domestic | M | NA | 271 | 2796.31 | 30.9 |
| Asian wild boar 1 | U | NA | 155 | 1966.39 | 28.9 |
| Asian wild boar 2 | U | NA | 44 | 2120.00 | 33.9 |
| Asian wild boar (Japan) | U | NA | 1172 | 1573.41 | 17.5 |
| European domestic | F | NA | 493 | 1859.01 | 28.4 |
| European wild boar 1 | M | NA | 592 | 1912.82 | 16.2 |
| European wild boar 2 | U | NA | 708 | 1401.60 | 18.4 |