List of primers and probes used for transcript analysis
Primer name | Primer sequence |
Hprt fw | 5′-GGCCAGACTTTGTTGGATTTG-3′ |
Hprt rev | 5′-TGCGCTCATCTTAGGCTTTGT-3′ |
Tbp fw | 5′-CCCTATCACTCCTGCCACACCAGC-3′ |
Tbp rev | 5′-GTGCAATGGTCTTTAGGTCAAGTTTACAGCC-3′ |
Gapdh fw | 5′-AGGTCGGTGTGAACGGATTTG-3′ |
Gapdh rev | 5′-TGTAGACCATGTAGTTGAGGTCA-3′ |
Actin fw | 5′-GGCTGTATTCCCCTCCATCG-3′ |
Actin rev | 5′-CCAGTTGGTAACAATGCCATGT-3′ |
Rplp0 fw | 5′-AGATTCGGGATATGCTGTTGGC-3′ |
Rplp0 rev | 5′-TCGGGTCCTAGACCAGTGTTC-3′ |
Cpt1 fw | 5′-CTCCGCCTGAGCCATGAAG-3′ |
Cpt1 rev | 5′-CACCAGTGATGATGCCATTCT-3′ |
Pdh E1β fw | 5′-AGGAGGGAATTGAATGTGAGGT-3′ |
Pdh E1β rev | 5′-ACTGGCTTCTATGGCTTCGAT-3′ |
Pdhx fw | 5′-GCTTCACTGTAACCAGCCG-3′ |
Pdhx rev | 5′-CCCTTGCTCCATCGTAGGAGA-3′ |
Pdh E2 fw | 5′-GACCAGCTTAAAGCCACAGG-3′ |
Pdh E2 rev | 5′-AGAGGACTAACGAACACCCTT-3′ |
Mtnd2 fw | 5′-ATACTAGCAATTACTTCTATTTTCATAGGG-3′ |
Mtnd2 rev | 5′-GAGGGATGGGTTGTAAGGAAG-3′ |
Mtnd5 fw | 5′-ACGAAAATGACCCAGACCTC-3′ |
Mtnd5 rev | 5′-GAGATGACAAATCCTGCAAAGATG-3′ |
Bmal1 fw | 5′-CCAAGAAAGTATGGACACAGACAAA-3′ |
Bmal1 rev | 5′-GCATTCTTGATCCTTCCTTGGT-3′ |
Bmal1 probe | FAM-TGACCCTCATGGAAGGTTAGAATATGCAGAA-TAMRA |
Per2 rev | 5′-ATGCTCGCCATCCACAAGA-3′ |
Per2 fw | 5′-GCGGAATCGAATGGGAGAAT-3′ |
Per2 probe | FAM-ATCCTACAGGCCGGTGGACAGCC-TAMRA |