Skip to main content
. Author manuscript; available in PMC: 2016 Oct 13.
Published in final edited form as: J Chem Theory Comput. 2015 Sep 17;11(10):4770–4779. doi: 10.1021/acs.jctc.5b00662

Table 2.

Peptides used and their corresponding native structures. Residue numbers indicate which part of the corresponding PDB was used.

Name Sequence Structure Pdb id
Matα2/MCM1EK VFNVVTQDMINKST α-helix/β-hairpin 1MNM
(residue 115–128)
39
EK peptide YAEAAKAAEAAKAF α-helix Ideal (Circular
Dichroism; 40%
helical)32,42
Ribonuclease A
C-peptide analog
AETAAAKFLRAHA α-helix 5RSA analog34,40
Tc5b NLYIQWLKDGGPSSGRPPPS α-helix/coil 1L2Y36
Protein G
C-termini
GEWTYDDATKTFTVTE β-hairpin 1GB135
(residue 41–56)
41
Trpzip2 SWTWENGKWTWK β-hairpin 1HRX38
Nrf2 peptide AQLQLDEETGEFLPIQ β-hairpin 2FLU
(resid 72–l87)
33
HHS Vulnerability Disclosure