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. 2016 Mar 31;10:70. doi: 10.3389/fncel.2016.00070

Table 2.

Detailed protocol for gel and electrophoresis experiments.

Stacking gel Resolving gel 10X Running Buffer Light gel Heavy gel Moving solution Conservation buffer DTT solution Iodoacetamine solution Equilibration buffer 5X running buffer Overlays solution
40% acrylamide/bisacrylamide (37.5:1) (w/v) 1 mL 6.3 mL
1.5M TRIS-HCl, pH 8.8 4.5 L 52.5 mL 52.5 mL 50 mL 100 mL 50 mL
0.5M TRIS-HCl, pH 6.8 2.5 mL
10% SDS (w/v) 0.1 mL 0.18 mL 2.1 mL 2.1 mL 4 mL
10% APS 0.05 mL 0.09 mL 2.1 mL 1.05 mL
TEMED 0.015 mL 0.009 mL 360 μL 60 μL
Glycine 120 g
SDS 40 g 20 g 40 g
TRIS 576 g 60.5 g
30% acrylamide/bisacrylamide (37.5:1) (w/v) 68 mL 128 mL
Glycerol 18 mL 74 g 378 g
1% bromophenol blue 210 μL 20 μL
1M DTT 0.1 g
Iodoacetamine 1.12 g
Equilibration buffer 10 mL 25 mL
Urea 355 g
Agarose type I-A 0.4 g
Agarose type VII 0.1 g
5X running buffer 20 mL
Apyrogenic water 6.35 mL 6.93 mL to 4L 85 mL 14 mL 90 mL 296 mL To 1L to 4L 80 mL

Acrylamide/bisacrylamide (37.5:1) solution (w/v) (BioBasic Inc, Markham, Ontario, Canada), agarose type 1-A (Sigma, Oakville, Québec, Canada), ammonium persulfate (BioBasic Inc, Markham, Ontario, Canada), bromophenol blue (Sigma, Oakville, QC, Canada), dithiothreitol (DIT) (BioBasic Inc, Markham, Ontario, Canada), glycerol (BioBasic Inc, Markham, Ontario, Canada), glycine (BioBasic Inc, Markham, Ontario, Canada), iodoacetamide (BioBasic Inc, Markham, Ontario, Canada), sodium dodecyl sulfate (SDS) (BioBasic Inc, Markham, Ontario, Canada), TRIS (BioBasic Inc, Markham, Ontario, Canada), TRIS-HCI (BioBasic Inc, Markham, Ontario, Canada), tetramethylethylenediamine (TEMED) (BioBasic Inc, Markham, Ontario, Canada), urea (BioBasic Inc, Markham, Ontario, Canada), 2-hydroxythylagarose type VII (Sigma, Oakville, Quebec, Canada).