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. 2016 Mar 21;5(3):e208. doi: 10.1038/oncsis.2016.17

Table 1. Oligonucleotides representing different potential Kaiso-binding sites in the TGFβR1 promoter.

TGFβR1 probe name Oligonucleotide sequence (5–3′) Location
KBS-1 WT CTGATTCCTGCTATCAAGGTTTA −1212 to −1208
KBS-1 MUT CTGATTCCTTCTATCAAGGTTTA  
KBS-2 WT ATTTTGGCGTCGCAGAGGGAAGGTGGGTGGAGCGTCTCGCAGTAAATTAG −1035 to −1002
KBS-2 MUT ATTTTGGCGTCTCAGAGGGAAGGTGGGTGGAGCGTCTCTCAGTAAATTAG  
KBS-3 WT GGTGCTGGGGCTGGCAGACCCCGCC −289 to −283
KBS-3 MUT GGTGCTGGGGCGGGCAGACCCCGCC  
KBS-4 WT GCTGGGTCCCGCTTGGCAGCTCG −117 to −111
KBS-4 MUT GCTGGGTCCCGCTGGGCAGCTCG  

Abbreviations: KBS, Kaiso-binding sequence; MUT, mutated; TGFβR1, transforming growth factor β receptor 1; WT, wild type. KBS—emboldened; CpG dinucleotides—underline; mutated nucleotides—italic.