Table 1.
Residues | Linker conformation | Kinase domain conformation | # Windows | ns/window | k kcal/(mol·Å2) | d w (Å) | |
---|---|---|---|---|---|---|---|
WT | 253‐523 | Restricted↔released | Inactive | 245 | 30 | 10 | 0.5 |
WT | 253‐523 | Restricted↔released | Active | 238 | 30 | 10 | 0.5 |
W260A | 253‐523 | Restricted↔released | Inactive | 245 | 40 | 10 | 0.5 |
WT | 260‐521 | n/a | Inactive↔active | 1101 | 15 | 20 | 0.25 |
W260A | 260‐521 | n/a | Inactive↔active | 681 | 16 | 20 | 0.5 |
Supporting Information Fig. S3 shows the sequence and the structural motifs of Src which are utilized in the present work. The conformation of the kinase domain in each one of the top three constructs was not subject to any restraining potential and was found to be stable during umbrella sampling calculations of the linker region. Y416 in the A‐loop is not phosphorylated in all five sets of umbrella sampling calculations. “n/a” stands for not applicable.