Table 3. Proportion of samples, in each habitat/region and species category, presenting in their diet composition at least one sequence identified in a given plant family for the P6 loop of the chloroplast trnL (UAA) intron.
Sequence ID |
Taxonomic identification |
Best match |
C. minutus |
C. flamarioni |
|||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Family | Genus | Species | Fields (n=39) | Dunes (n=22) | Sympatry (n=6) | All samples (n=67) | Dunes (n=85) | Sympatry (n=13) | All samples (n=98) | ||
gh0182 | Amaranthaceae | NA | NA | EF688748 | — | — | — | — | 1.18% | 7.69% | 2.04% |
gh0059 | Amaryllidaceae | Nothoscordum | NA | AF508517 | — | 4.55% | — | 1.49% | — | — | — |
gh0021 | Apiaceae | Centella | Centella asiatica | P147 | 2.56% | — | 16.67% | 2.99% | — | — | — |
gh0145 | Apiaceae | Eryngium | Eryngium sanguisorba | P218 | |||||||
gh0030 | Apocynaceae | NA | NA | AF214362 | — | 13.64% | — | 4.48% | — | — | — |
gh0003 | Araliaceae | Hydrocotyle | Hydrocotyle bonariensis | P08_P39_P49_P118 | 35.90% | 72.73% | 83.33% | 52.24% | 64.71% | 53.85% | 63.27% |
gh0011 | Asteraceae | NA | NA | GQ244965 | 20.51% | 22.73% | 16.67% | 20.90% | 10.59% | 15.38% | 11.22% |
gh0018 | Asteraceae | NA | NA | AF098853 | |||||||
gh0025 | Asteraceae | NA | NA | AB070918 | |||||||
gh0036 | Asteraceae | NA | NA | AY952925 | |||||||
gh0094 | Asteraceae | NA | NA | AF452505 | |||||||
gh0263 | Asteraceae | Acanthospermum | Acanthospermum australe | P61 | |||||||
gh0167 | Bignoniaceae | NA | NA | EF105090 | — | 4.55% | — | 1.49% | — | — | — |
gh0068 | Caryophyllaceae | Cardionema | Cardionema ramosissimum | P88 | 5.13% | — | — | 2.99% | — | — | — |
gh0073 | Convolvulaceae | NA | NA | AJ430942 | — | 9.09% | — | 2.99% | — | — | — |
gh0188 | Ericaceae | Empetrum | NA | AY496911 | — | — | — | — | 1.18% | — | 1.02% |
gh0005 | Fabaceae | Desmodium | Desmodium incanum | P27_P73_P124 | 25.64% | 9.09% | 33.33% | 20.90% | 2.35% | — | 2.04% |
gh0064 | Fabaceae | Desmodium | NA | EU717290 | |||||||
gh0143 | Fabaceae | Stylosanthes | NA | AJ230730 | |||||||
gh0519 | Fabaceae | Vigna | NA | AB304049 | |||||||
gh0200 | Iridaceae | Herbertia | Herbertia lahue | GQ214203 | — | — | — | — | 1.18% | — | 1.02% |
gh0101 | Oxalidaceae | Oxalis | NA | AJ582295 | 2.56% | — | — | 1.49% | — | — | — |
gh0001 | Poaceae | NA | NA | AM404244 | 100% | 95.45% | 100% | 98.51% | 98.82% | 100% | 98.98% |
gh0006 | Poaceae | Axonopus | NA | AY769150 | |||||||
gh0012 | Poaceae | NA | NA | EF156672 | |||||||
gh0002 | Poaceae | NA | NA | AB223118 | |||||||
gh0007 | Poaceae | NA | NA | AY116268 | |||||||
gh0009 | Poaceae | NA | NA | AJ489466 | |||||||
gh0004 | Poaceae | Paspalum | Paspalum notatum | AY769174 | |||||||
gh0013 | Poaceae | NA | NA | AB571314 | |||||||
gh0029 | Poaceae | Panicum | NA | AY142726 | |||||||
gh0032 | Poaceae | NA | NA | AJ488528 | |||||||
gh0034 | Poaceae | Leersia | Leersia hexandra | AY792527 | |||||||
gh0014 | Poaceae | NA | NA | AY116257 | |||||||
gh0066 | Poaceae | Garnotia | Garnotia tenella | GQ869934 | |||||||
gh0069 | Poaceae | Cenchrus | NA | EU940008 | |||||||
gh0072 | Poaceae | NA | NA | EF137560 | |||||||
gh0082 | Poaceae | NA | NA | AM404244 | |||||||
gh0092 | Poaceae | NA | NA | AB042240 | |||||||
gh0046 | Poaceae | Luziola | NA | AY792536 | |||||||
gh0151 | Poaceae | NA | NA | AY116268 | |||||||
gh0223 | Poaceae | NA | NA | GQ870005 | |||||||
gh0043 | Poaceae | NA | NA | AY769150 | |||||||
gh0288 | Poaceae | NA | NA | AY116268 | |||||||
gh0028 | Poaceae | NA | NA | AY177347 | |||||||
gh0717 | Poaceae | NA | NA | AY792527 | |||||||
gh0901 | Poaceae | NA | NA | AY142726 | |||||||
gh1371 | Poaceae | NA | NA | GQ869934 | |||||||
gh0061 | Polygonaceae | Rumex | NA | AB219660 | — | — | — | — | 1.18% | — | 1.02% |
gh0120 | Polygonaceae | NA | NA | DQ860530 | |||||||
gh0074 | Rubiaceae | Richardia | Richardia stellaris | P211 | 7.69% | — | — | 4.48% | — | — | — |
gh0156 | Rubiaceae | Richardia | Richardia brasiliensis | P66 | |||||||
gh0328 | Rubiaceae | Richardia | Richardia brasiliensis | P66 | |||||||
gh0056 | Salicaceae | NA | NA | AF327597 | — | — | — | — | 1.18% | — | 1.02% |
gh0505 | Solanaceae | NA | NA | AY266235 | 2.56% | — | — | 1.49% | — | — | — |
gh0428 | Verbenaceae | NA | NA | AF231884 | — | — | — | — | 1.18% | — | 1.02% |
The taxonomic identification and the best match sequence identifier from GenBank are shown for each sequence. The number of samples for each category is within parentheses.