Table 3. Means and s.e. of cross-validated prediction accuracies of genomic selection for Fusarium head blight resistance of 372 wheat lines based on the three different marker sets 9k SNP array, 90k SNP array and SSR markers and the three different biometrical models RR-BLUP, RKHSR and Bayes-Cπ.
| Marker set | RR-BLUP | RKHSR | Bayes-Cπ |
|---|---|---|---|
| 9K SNP | 0.706±0.032 | 0.724±0.033 | 0.716±0.031 |
| 90K SNP | 0.740±0.031 | 0.742±0.036 | 0.721±0.032 |
| SSR | 0.710±0.034 | 0.713±0.035 | 0.684±0.037 |
Abbreviations: RKHSR, reproducing Kernel Hilbert space regression; RR-BLUP, ridge regression best linear unbiased prediction; SNP, single-nucleotide polymorphism; SSR, simple sequence repeat.