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. 2014 Nov 12;114(3):318–326. doi: 10.1038/hdy.2014.104

Table 3. Means and s.e. of cross-validated prediction accuracies of genomic selection for Fusarium head blight resistance of 372 wheat lines based on the three different marker sets 9k SNP array, 90k SNP array and SSR markers and the three different biometrical models RR-BLUP, RKHSR and Bayes-Cπ.

Marker set RR-BLUP RKHSR Bayes-Cπ
9K SNP 0.706±0.032 0.724±0.033 0.716±0.031
90K SNP 0.740±0.031 0.742±0.036 0.721±0.032
SSR 0.710±0.034 0.713±0.035 0.684±0.037

Abbreviations: RKHSR, reproducing Kernel Hilbert space regression; RR-BLUP, ridge regression best linear unbiased prediction; SNP, single-nucleotide polymorphism; SSR, simple sequence repeat.