Table 3. List of early seedling vigor (ESV) traits associated polymorphic microsatellite markers in rice (1).
S.No | Marker | Traits associated | Chr | Amplicon Size (bp) | Tm | Reference |
---|---|---|---|---|---|---|
1 | RM13 | SL,RL,DW,GR,SDW | 5 | 141 | 55 | [19] |
2 | RM125 | GR, GP and GI | 7 | 127 | 55 | [20] |
3 | RM26 | TDW,SDW,RDW,VI,RARL,SL,GR | 5 | 112 | 55 | [21–24] |
4 | RM87 | SDW | 5 | 151 | 55 | [19,21] |
5 | RM3839 | SDW | 4 | 218 | 50 | [25] |
6 | RM161 | RL,DW,SEV,FV.GR | 5 | 187 | 61 | [26] |
7 | RM218 | SL,FV | 3 | 148 | 55 | [27] |
8 | RM228 | SS,SL,FW,WS | 10 | 154 | 55 | [26–27] |
9 | RM9 | GR,SDW,SFW | 1 | 136 | 55 | [20] |
10 | RM6091 | GR,GI | 11 | 126 | 50 | [20] |
11 | RM7075 | GR | 1 | 155 | 50 | [20] |
12 | RM258 | RDW, | 10 | 148 | 55 | [21] |
13 | RM3428 | GP,GI,NL,SS | 11 | 156 | 55 | [20] |
14 | RM334 | SDW, | 5 | 182 | 55 | [19, 21] |
15 | RM148 | GR,SL,SEV,FW | 3 | 129 | 55 | [19, 26, 27] |
16 | RM250 | SDW, | 2 | 153 | 55 | [28] |
17 | RM221 | SEV, | 2 | 192 | 55 | [26] |
18 | RM264 | GR,SL,RL | 8 | 178 | 55 | [19] |
19 | RM230 | GR,SL,RL | 8 | 257 | 55 | [19] |
20 | RM253 | SL, GR, | 6 | 141 | 55 | [19, 23] |
21 | RM85 | GR,SL,RL,SEV,FW | 3 | 107 | 55 | [19, 26] |
22 | RM340 | SL,GP | 6 | 163 | 55 | [19, 20] |
23 | RM249 | SV, FV, | 5 | 121 | 55 | [19] |
24 | RM225 | SV,GR, SDW, SL | 6 | 140 | 55 | [19, 29] |
25 | RM263 | SL,SDW | 2 | 199 | 55 | [22] |
26 | RM30 | GR, SDW, SL | 6 | 105 | 55 | [29] |
27 | RM223 | SW,GR,SL,SEV | 8 | 165 | 55 | [19, 26] |
28 | RM1339 | SL | 1 | 144 | 55 | [30] |
29 | RM16 | SL,SDW,RL,GR | 3 | 181 | 55 | [19] |
30 | RM252 | SEV,GP,GR,RA | 5 | 216 | 55 | [19, 21, 26] |
31 | RM336 | GR, SDW, SL | 7 | 154 | 55 | [29] |
32 | RM8085 | SL, | 1 | 126 | 55 | [30] |
33 | RM19 | GR, SDW, SL | 12 | 226 | 55 | [29] |
34 | RM6 | SDW | 2 | 163 | 55 | [22] |
35 | RM168 | SL,DW,GR,RL,SEV,FW | 3 | 116 | 55 | [19, 26] |
36 | RM224 | GR, GR, SDW, SL | 11 | 157 | 55 | [29, 31] |
37 | RM7389 | SL | 3 | 111 | 55 | [30] |
38 | RM21 | GR, SDW, SL | 11 | 157 | 55 | [29] |
39 | RM341 | GR, | 2 | 172 | 55 | [23] |
SDW-Shoot dry weight; SL-Shoot length; RDW-Root dry weight; RL-Root length; TFW-Total fresh weight; TDW-Total dry weight; RA-Root activity; GP-Germination percentage; GR-Germination rate; GI-Germination index; FGC-First germination count; EGC-Ending germination count; ME-Mesocotyl elongation; PL-Plumule length; COL-Coleorhiza length; CL-Coleoptile length; VI-Vigor index; RSC-Reducing sugar content; SW-Seed weight, SE-Seedling establishment, SFW-Seedling fresh weight, SS-Seed size, SEV-Seedling early vigor, LA-Leaf area, NL-Number of leafs; SR-Seed reserve utilization efficiency, WS-Weight of mobilized seed reserve, FV-Field vigor, SV-Seed vigor.