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. 2014 Apr 29;8(8):1727–1738. doi: 10.1038/ismej.2014.61

Table 1. Comparative genomics of thiamin biosynthesis in the Pelagibacterales.

Strain thiC thiD thiE_0583a thiE_0360a thiF thiS thiG csdBb thiL thiB tenA
Ca. P. ubique Absent 637671479 637671458 637671224 637671266 637671603 637671604 637671616 637671913 Absent Absent
HTCC1002 Absent 639129819 639129840 639130075 639130033 639129702 639129701 639130662, 639129689 639130810 Absent Absent
HTCC7211 Absent 2503353714 2503353735 2503352435 2503352394 2503352877 2503352878 2503352890 2503353193 Absent Absent
HTCC9565 Absent 2503364149 2503364170 2503364413 2503364372 2503364883 2503364884 2503364896 2503365124 Absent Absent
HIMB5 Absent 2504109247 2504109269 2504109551 2504109508 2504108506 2504108507 2504108519, 2504109389 2504108893 Absent Absent
HIMB114 Absent 2503356000 2503356022 2503356319 2503356274 2503355884 2503355883 2503355872 Absent Absent Absent
IMCC9063 Absent 2505688345 2505688367 2505687345 2505687250 2505687878 2505687879 2505688259 Absent Absent 2505687352
HIMB59 Absent Absent Absent Absent 2504110146 Absent Absent 2504110964 2504110802 2504111022 Absent

Gene numbers are IMG/ER Gene IDs (https://img.jgi.doe.gov/er).

a

There are two copies of thiE in Ca. P. ubique: SAR11_0583 and SAR11_0360.

b

csdB is predicted to encode the cysteine desulfurase activity necessary for thiazole biosynthesis (see Supplementary Methods).