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. 2016 Apr 1;11(4):e0150413. doi: 10.1371/journal.pone.0150413

Table 1. Summary information of the GIs predicted in the genome of UM_CSW.

GIs Genomic Length (bp) Number of CDSs G+C content (%) Selected Genes
GI1 11,040 15 62.3 ThiJ/PfpI family protein
putative transcriptional regulator, AraC family
low molecular weight T-cell antigen TB8.4
GI2 14,745 13 61.7 Transcriptional regulator, TetR family
putative cytochrome P450 hydroxylase
Hydrolase
Transcriptional regulator KorSA, GntR family
Transfer protein traSA
GI3 10,251 10 62.8 Coenzyme F420-dependent oxidoreductase
Transcriptional regulator, TetR family
putative cytochrome P450 hydroxylase
Long-chain-fatty-acid—CoA ligase (EC 6.2.1.3)
GI4 11,329 15 61.3 TesB-like acyl-CoA thioesterase 4
Transcriptional regulator, TetR family
PROBABLE CHOLESTEROL DEHYDROGENASE
Transcriptional regulator, IclR family
GI5 14057 12 58 ATP-dependent DNA helicase UvrD/PcrA
putative ATPase
GI6 12666 12 59.7 NADH oxidase (putative)
dNTP triphosphohydrolase, broad substrate specificity, subgroup 2
DNA methylase N-4/N-6
GI7 12727 5 59.9 Superfamily II DNA/RNA helicases, SNF2 family
Adenine-specific DNA methylase containing a Zn-ribbon
GI8 37271 37 62.6 Integrase
Death on curing protein, Doc toxin
Long-chain-fatty-acid—CoA ligase (EC 6.2.1.3)
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Transcriptional regulator, GntR family
L-carnitine dehydratase/bile acid-inducible protein F
Alpha-methylacyl-CoA racemase (EC 5.1.99.4)
MaoC family protein
Alcohol dehydrogenase (EC 1.1.1.1)
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Enoyl-CoA hydratase (EC 4.2.1.17)
3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.-)
putative acyl-CoA dehydrogenase (EC:1.3.99.-)
acyl-CoA dehydrogenase domain protein
Acyl-CoA thioesterase II (EC 3.1.2.-)
probable oxidoreductase/Short-chain dehydrogenase
putative cytochrome P450 hydroxylase