Table 4. F1-ATP synthase γ subunit single nucleotide polymorphism (SNP) observed within the studied trypanosome stocks and strains or retrieved from GenBank.
Some SNPs were only present in T.b. b. TREU927 (G6A, C9T,C572G), T.b.b 29–13 (C149G, A168C, C866T) and T.b.b. STIB 920 (G738C) and are not represented in the table. del = deletion, GAN: GenBank accession number, * identical to all Ethiopian T. evansi type A stocks, ** identical to all Ethiopian T. evansi type B stocks. Blank spaces indicate no change and–indicates missing sequence information.
| Stock/strain | A93G | C142T | C194T | A198G | G294A | T321C | A356T | T654C | T663C | G801T | T807C | G817C | 841–843 GCT | A844T | T867G | A882G | T892C | GAN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| T.b.g. DAL972 | G | G | T | G | Tbg972.10.90 | |||||||||||||
| T.b.g. LiTat 1.3 | G | G | T | G | KT934830 | |||||||||||||
| T.b.g. ABBA | G | G | KT934831 | |||||||||||||||
| T. ev. RoTat 1.2* | T | T | KT934832 | |||||||||||||||
| T. ev. RoTat 1.2* | T | del | KT934833 | |||||||||||||||
| T. ev. STIB 810 | T | EU185797 | ||||||||||||||||
| T. ev. STIB 810 | T | del | EU185798 | |||||||||||||||
| T. ev. KETRI 2479** | C | C | G | KT934834 | ||||||||||||||
| T. ev. KETRI 2479** | T | KT934835 | ||||||||||||||||
| T. ev. KETRI 2479 | - | - | - | - | - | - | - | - | - | C | T | G | EU185794 | |||||
| T. eq BoTat 1.1 | C | C | C | EU185793 | ||||||||||||||
| T. eq. STIB 841 | Y | R | C | W | Y | Y | G | C | EU185792 | |||||||||
| T. eq. Dodola 940 | T | C | C | G | KT934836 | |||||||||||||
| T.b.b. AnTat 1.1E | T | C | C | G | KT934837 | |||||||||||||
| T.b.b. AnTat 1.1E | A | C | KT934838 | |||||||||||||||
| T.b.b. STIB 920 | C | C | C | G | EU185791 | |||||||||||||
| T.b.b. 29–13 | - | T | C | C | G | C | EU185790 | |||||||||||
| T.b.b. TREU927 | G | A | C | T | C | Tb927.10.180 |