Table 1. Significant differentially expressed genes involved in cold, drought, salt, hypoxia, and pathogen stresses in transgenic Arabidopsis.
| AGI locus | Symbol | Fold change | FDR | Response to abiotic or biotic stress* |
||||
|---|---|---|---|---|---|---|---|---|
| Cold | Drought | Salt | Hypoxia | Pathogen | ||||
| Upregulated genes | ||||||||
| AT5G39890 | PCO2 | 8.05 | 0.0056 | YES | ||||
| AT5G54470 | BBX29 | 5.62 | 0.0056 | YES | ||||
| AT2G44840 | ATERF13 | 4.81 | 0.0360 | YES | YES | |||
| AT5G47230 | ERF5 | 4.52 | 0.0056 | YES | ||||
| AT4G25480 | CBF3 | 4.47 | 0.0056 | YES | YES | YES | ||
| AT2G16060 | GLB1 | 4.36 | 0.0056 | YES | ||||
| AT4G25490 | CBF1 | 3.87 | 0.0273 | YES | YES | |||
| AT5G27420 | CNI1 | 3.57 | 0.0056 | YES | YES | |||
| AT2G20880 | ERF053 | 3.46 | 0.0056 | YES | YES | |||
| AT2G38470 | WRKY33 | 3.42 | 0.0056 | YES | YES | YES | YES | |
| AT1G76650 | CML38 | 3.35 | 0.0056 | YES | ||||
| AT2G40140 | CZF1 | 3.21 | 0.0056 | YES | YES | |||
| AT5G54490 | PBP1 | 3.18 | 0.0056 | YES | YES | |||
| AT1G02450 | NIMIN1 | 3.13 | 0.0498 | YES | YES | |||
| AT3G02550 | LBD41 | 3.13 | 0.0056 | YES | ||||
| AT1G27730 | STZ | 3.12 | 0.0056 | YES | YES | YES | ||
| AT3G14440 | NCED3 | 2.69 | 0.0056 | YES | YES | YES | ||
| AT1G66090 | – | 2.62 | 0.0056 | YES | ||||
| AT5G54610 | ANK | 2.56 | 0.0056 | YES | ||||
| AT1G09350 | AtGolS3 | 2.51 | 0.0391 | YES | ||||
| AT3G56710 | SIB1 | 2.49 | 0.0056 | YES | ||||
| AT5G57220 | CYP81F2 | 2.46 | 0.0102 | YES | YES | |||
| AT5G15120 | PCO1 | 2.45 | 0.0441 | YES | ||||
| AT3G55980 | SZF1 | 2.42 | 0.0056 | YES | ||||
| AT5G60900 | RLK1 | 2.37 | 0.0056 | YES | ||||
| AT4G25470 | CBF2 | 2.36 | 0.0418 | YES | ||||
| AT3G61890 | ATHB-12 | 2.35 | 0.0214 | YES | YES | YES | ||
| AT5G61600 | ERF104 | 2.27 | 0.0056 | YES | ||||
| AT2G33380 | RD20 | 2.16 | 0.0056 | YES | YES | YES | YES | |
| AT5G20830 | SUS1 | 2.08 | 0.0056 | YES | YES | YES | ||
| AT3G56400 | WRKY70 | 2.06 | 0.0056 | YES | YES | YES | ||
| AT1G32920 | – | 2.01 | 0.0056 | YES | ||||
| Downregulated genes | ||||||||
| AT1G35140 | PHI-1 | −7.12 | 0.0056 | YES | ||||
| AT2G26020 | PDF1.2b | −6.61 | 0.0214 | YES | ||||
| AT1G21910 | DREB26 | −3.74 | 0.0056 | YES | ||||
| AT2G14610 | PR1 | −3.49 | 0.0056 | YES | YES | |||
| AT4G16260 | – | −2.84 | 0.0056 | YES | YES | |||
| AT5G57560 | TCH4 | −2.66 | 0.0056 | YES | ||||
| AT3G05727 | – | −2.03 | 0.0056 | YES | ||||
*The annotation of all genes was retrieved from TAIR 10.