Table 2. Per sample (sample) and per genotype (genotype) costs ($).

N samples	N MIPs
	100		1000		5000
	sample	genotype	sample	genotype	sample	genotype
100	16.6	0.166	98.5	0.098	462.5	0.092
1000	8.3	0.083	16.5	0.017	52.9	0.011
10000	7.5	0.075	8.3	0.008	12.0	0.002

These costs include probe synthesis ($9.1 per MIP, does not depend on the number of samples) and reagents for pool phosphorylation, hybridization, gap filling, ligation and PCR amplification ($7.4 per sample, does not depend on the number of MIPs).