Table 1.
Database identifications.
| Reference proteome | Six frame database | GeneMarkS database | Combined | |
|---|---|---|---|---|
| Reference protein ORF identifications | 2788 | 2753 | 2773 | 2810 |
| Reference TSS validations | 554 | 282 | 439 | 558 |
| All upstream gene model modifications | 0 | 70 | 42 | 81 |
| Upstream TSS identifications | 0 | 29 | 28 | 39 |
| Downstream TSS identifications | 0 | 0 | 24 | 24 |
| Novel ORF identifications | 0 | 63 | 42 | 63 |
A table comparing Reference protein ORF identifications, TSS validations, upstream gene model modifications, upstream TSS identifications, downstream TSS identifications and novel ORF identifications using three different databases.