Table 1.
Gene product name (gene name) | IDa | Primer sequences (5′‐3′) | Amplicon length (bp) | Amplicon spliced (bp) | Intron analyzed | Experiments |
---|---|---|---|---|---|---|
Asparagine synthetase 2 (asn‐2) | NCU04303 | |||||
F: | ATCCGTCACCGTGGTCCTGAT | 188 | 49 | Intron 3 | RT‐PCR | |
R: | TGTTGTGGCAAGTGACGCTGC | |||||
F: | CAACCTTTCGCCCAACC | 63 | – | Intron 3 | qRT‐PCR | |
R: | TTGACTCGATTGACACTTTTAT | |||||
F: | GCGGCAGCGTCACTTG | 142 | 57 | Intron 4 | RT‐PCR | |
R: | CCGACGATACTGAGACGCT | |||||
F: | TGCGGATAAGACGATGGTTG | 182 | 112 | Intron 5 | RT‐PCR | |
R: | TGCCAAGCGTCTTGTTTCTA | |||||
C6‐zinc finger (fluffy) | NCU08726 | |||||
F: | GCCAAGACAACACCTAACACCGAA | 299 | 149 | Intron 1 | RT‐PCR | |
R: | AGATGGTCCTTGGTACGCCATTTC | |||||
CaaX farnesyltransferase beta subunit Ram1 (ram‐1) | NCU05999 | |||||
F: | CAACCCAACAACGAGGCCCATGGC | 503 | 313 | Intron 3 | RT‐PCR | |
R: | CGACTATAGAGACTCTCCGGCGCA | |||||
Actin | NCU04173 | |||||
F: | GTATGTGCAAGGCCGGTTTCG | 305 | 109 | Introns 3/4 |
RT‐PCR qRT‐PCR |
|
R: | TCCTTCTGGCCCATACCGATCATG | |||||
Tubulin alpha‐1 | NCU09132 | |||||
F: | CCTCGTCTTCCACTCCTTCGG | 445 | 190 | Intron 4 |
RT‐PCR qRT‐PCR |
|
R: | ACTGTGTTCGAGGGTGCTGTG |
Gene accession number at the N. crassa genome database at the Broad Institute.