Table 2.
, Negative ion cross section measurements for high-mannose N-glycan
Man | Structure |
m/z
[M+H2PO4)− |
Isomer | Cross section data (Å2) | ||||||
---|---|---|---|---|---|---|---|---|---|---|
TW IM-MS | Linear | |||||||||
Nitrogen | Helium | Nitrogen | Helium | |||||||
Cross section (Å2) |
SD | n | Reference sample |
Projected cross section (Å2) |
Cross section (Å2) |
Cross section (Å2) |
||||
3 | 19 | 1007.3 | - | 282.8 | - | 2 | - | 204.9 | 282.4 | 201.4 |
4 | 15 | 1169.3 | d1 | 305.6 | - | 1 | - | 225.6 | 317.4 | 233.1 |
18,21 | d2(d3) | 309.4 | - | 1 | - | 229.1 | ||||
5 | 17 | 1331.4 | d1 | 340.0 | 2.20 | 13 | 344.8 | 265.1 | 347.7 | 264.8 |
6 | 14 | 1493.5 | d1 | 366.5 | 2.40 | 13 | 367.7 | 280.1 | 372.4 | 291.9 |
12 | d2 | 363.0 | - | 1 | - | 276.7 | - | - | ||
13 | d3 | 371.6 | - | - | 284.7 | - | - | |||
7 | 11 | 1655.5 | d1d1 | 386.5 | 1.11 | 7 | 389.1 | 297.9 | 396.2 | 312.8 |
8 | d1d2 | 387.7 | - | 1 | - | 299.2 | - | - | ||
10 | d1d3 | 394.8 | 2.50 | 13 | - | 307.2 | - | - | ||
8 | 7 | 1817.6 | d1d1d3 | 418.9 | 3.69 | 9 | 416.7 | 327.4 | 422.3 | 335.7 |
5 | d1d1d2 | 400.2 | - | 2 | - | 310.5 | - | - | ||
6 | d1d2d3 | 414.2 | - | 2 | - | 322.9 | - | - | ||
9 | 4 | 1979.6 | d1d1d2d3 | 439.0 | 2.63 | 9 | 431.7 | 345.1 | 442.4 | 354.3 |
26 | d1d1d3,3- Me |
438.0 | - | 1 | - | 344.3 | - | - | ||
10 | 27 | 2141.7 | d1d1d2d3- 3-Me |
459.6 | - | 1 | - | 363.8 | - | - |
G3M7 | 23 | 2141.7 | d1d1 | 451.9 | - | 3 | - | 357.5 | - | - |
G3M8 | 22 | 2303.7 | d1d1d3 | 482.0 | - | 1 | - | 384.4 | - | - |
G3M9 | 1 | 2465.8 | d1d1d2d3 | 490.9 | - | 2 | - | 392.6 | - | - |