Table 3. Evolutionary rates estimated from the HMPV genomes.
Evolutionary rate (10−3 substitutions/site/year) | ||||
---|---|---|---|---|
Coding region | NT length analyzed | Nucleotide | Synonymous | Nonsynonymous |
Complete | 12,133 | 0.52 (0.27–0.76) a | - | - |
N | 1,152 | 0.65 (0.36–0.92) | 0.52 | < 10−5 |
P | 885 | 0.85 (0.42–1.29) | 0.50 | 0.20 |
M | 762 | 0.76 (0.38–1.16) | 0.55 | < 10−5 |
F | 1,617 | 0.60 (0.32–0.90) | 0.43 | < 10−5 |
M2 | 727 | 0.74 (0.42–1.06) | - | - |
M2-1 | 564 | - | 0.62 | 0.11 |
M2-2 | 216 | - | 0.53 | 0.19 |
SH | 531 | 1.57 (0.71–2.49) | 0.57 | 0.61 |
G | 444 | 2.13 (1.10–3.18) | 0.72 | 1.10 |
L | 6,015 | 0.43 (0.19–0.63) | 0.32 | < 10−5 |
a Lower and upper limits of 95% HPD are provided in parenthesis.