Table 4. Sequence identity of KUMC-MP genes compared with other HMPV sequences.
% similarity to KUMC-MP gene | ||||||||
---|---|---|---|---|---|---|---|---|
Classification | N | P | M | F | M2 | SH | G | L |
Overall | 90.7 | 87.1 | 90.4 | 89.7 | 90.7 | 75.5 | 61.3 | 90 |
Maximum | 99.3 | 98.5 | 99.9 | 99.3 | 98.7 | 97.9 | 97.7 | 99.1 |
KC562242 | KC562242 | KF530164 | KF530164 | KC562242 | KC562230 | KF530164 | KF530164 | |
KF530164 | KF530167 | KF530167 | KF530163 | KC562242 | KF530171 | |||
KF530171 | KF530171 | KF530171 | KF530171 | |||||
KF530173 | KF530173 | |||||||
(B1/USA) | (B1/AUSa, USA) | (B1/AUS) | (B1/AUS) | (B1/AUS, USA) | (B1/AUS, USA) | (B1/AUS) | (B1/AUS) | |
Minimum | 81.8 | 72.4 | 80.6 | 79.1 | 80.3 | 46.8 | 17 | 79.6 |
KJ627405 | JN184400 | KC403981 | KJ627381 | KC403977 | KJ627401 | KJ627399 | JN184399 | |
KJ627389 | KC403980 | |||||||
KJ627396 | KC562226 | |||||||
KJ627411 | KC562241 | |||||||
KJ627437 | ||||||||
(A2b/Peru) | (A2a/USA) | (A2a/AUS) | (A2b/Peru) | (A1/AUS) | (A2b/Peru) | (A2b/Peru) | (A1/AUS, USA) |
a AUS, Australia.