Table 4. Logistic models and related PCA results.
Intercept |
Colon |
Intercept |
Rectal |
||||||
---|---|---|---|---|---|---|---|---|---|
Comp. 1a | Comp. 2 | Comp. 3 | Comp. 1a | Comp. 3 | Comp. 4 | ||||
Logistic model | |||||||||
Est. coefficient | 1.19 | −1.40 | −1.09 | −1.95 | Est. coefficient | 3.07 | −2.90 | −1.32 | 0.95 |
S.e. | 0.46 | 0.27 | 0.28 | 0.48 | S.e. | 0.83 | 0.54 | 0.46 | 0.43 |
P-value | 0.01 | <0.001 | <0.001 | <0.001 | P-value | <0.001 | <0.001 | <0.01 | 0.03 |
Corresponding PCA resultsb | |||||||||
% of sample var. | 38.24 | 24.86 | 13.30 | % of Sample var. | 44.66 | 8.67 | 6.56 | ||
Included miRNA |
Loadings |
Included miRNA |
Loadings |
||||||
Hsa-miR-663b | −0.08 | −0.07 | −0.62 | Hsa-miR-663b | −0.23 | −0.36 | −0.30 | ||
Hsa-miR-4539 | 0.26 | 0.25 | −0.23 | Hsa-miR-17-5p | −0.31 | −0.08 | 0.07 | ||
Hsa-miR-17-5p | −0.38 | 0.09 | −0.09 | Hsa-miR-4323 | 0.24 | −0.40 | 0.30 | ||
Hsa-miR-20a-5p | −0.37 | 0.10 | −0.08 | Hsa-miR-20a-5p | −0.30 | −0.08 | 0.10 | ||
Hsa-miR-663a | 0.04 | 0.01 | −0.62 | Hsa-miR-378a-3p | 0.20 | −0.12 | −0.39 | ||
Hsa-miR-4538 | 0.26 | 0.26 | −0.16 | Hsa-miR-93-5p | −0.30 | −0.04 | −0.01 | ||
Hsa-miR-21-5p | −0.33 | 0.14 | 0.00 | Hsa-miR-4539 | 0.28 | −0.30 | −0.01 | ||
Hsa-miR-215 | −0.08 | 0.42 | 0.18 | Hsa-miR-378i | 0.19 | −0.12 | −0.39 | ||
Hsa-miR-4506 | −0.20 | −0.22 | 0.04 | Hsa-miR-21-5p | −0.26 | 0.12 | 0.35 | ||
Hsa-miR-92a-3p | −0.33 | 0.13 | −0.12 | Hsa-miR-92a-3p | −0.29 | −0.12 | 0.13 | ||
Hsa-miR-93-5p | −0.36 | 0.11 | −0.02 | Hsa-miR-145-5p | 0.10 | 0.29 | 0.07 | ||
Hsa-miR-192-5p | −0.10 | 0.42 | 0.17 | Hsa-miR-150-5p | 0.15 | 0.21 | −0.14 | ||
Hsa-miR-145-5p | −0.02 | 0.26 | 0.18 | Hsa-miR-3651 | −0.26 | −0.15 | 0.09 | ||
Hsa-miR-3651 | −0.33 | 0.11 | −0.12 | Hsa-miR-4749-3p | 0.25 | −0.30 | 0.31 | ||
Hsa-miR-378a-3p | 0.17 | 0.41 | −0.08 | Hsa-miR-4506 | −0.24 | 0.27 | −0.39 | ||
Hsa-miR-378i | 0.17 | 0.39 | −0.09 | Hsa-miR-424-3p | −0.24 | −0.22 | −0.05 | ||
— | — | — | — | Hsa-miR-6073 | 0.15 | 0.42 | 0.27 |
AIC, Akaike information criterion; miRNA, microRNA; PCA, principal component analysis.
The components listed are those included in the model; model selection was based on AIC statistics.
Loadings and % of sample variance refer to the component listed in the corresponding column.