Table 3.
Organization of Clusters in Families and Subfamilies for the Seven Species Considered in This Work
| Family | Subfamily | S. scitamineum | S. reilianum | U. maydis | U. hordei | M. pennsylvanicum | P. flocculosa | Ma. globosa | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1 | Ss-scaf02-1 | 38 | Sr-chr19-1 | 38 | Um-chr19-2 | 29 | Uh-scaf17-2 | 36 | Mp-scaf25-1 | 10 | ||||
| 2 | Ss-scaf09-1 | 11 | Sr-chr06-3 | 15 | Um-chr06-2 | 8 | |||||||||
| 2 | 1 | Ss-scaf30-2 | 18 | Sr-chr08-2 | 13 | Um-chr08-5 | 12 | Uh-scaf37-3 | 3 | ||||||
| 3 | 1 | Ss-scaf44-2 | 16 | Sr-chr05-4 | 26 | Um-chr05-6 | 8 | ||||||||
| 2 | Sr-chr01-2 | 3 | Um-chr01-4 | 3 | Pf-scaf17-2 | 3 | |||||||||
| 3 | Uh-scaf41-1 | 6 | Pf-scaf01-4 | 3 | |||||||||||
| 4 | Ss-scaf38-3 | 10 | Sr-chr11-1 | 4 | Um-chr11-1 | 15 | Uh-scaf07-1 | 10 | |||||||
| 4 | 1 | Ss-scaf36-1 | 14 | Sr-chr10-1 | 11 | Um-chr10-1 | 10 | Uh-scaf24-1 | 4 | Mp-scaf10-1 | 8 | ||||
| 5 | 1 | Ss-scaf21-1 | 4 | Sr-chr02-1 | 4 | Um-chr02-1 | 3 | Uh-scaf61-1 | 4 | ||||||
| 2 | Sr-chr20-3 | 4 | |||||||||||||
| 3 | Sr-chr01-4 | 3 | |||||||||||||
| 4 | Ss-scaf33-3 | 13 | Sr-chr12-1 | 7 | Um-chr12-1 | 6 | |||||||||
| 6 | 1 | Ss-scaf21-2 | 15 | Sr-chr02-2 | 14 | Um-chr02-3 | 6 | Uh-scaf61-1 | 6 | Mp-scaf71-1 | 3 | Pf-scaf03-1 | 12 | ||
| 7 | 1 | Ss-scaf44-1 | 4 | Sr-chr05-6 | 4 | ||||||||||
| 2 | Ss-scaf44-5 | 12 | Sr-chr05-1 | 17 | Um-chr20-1 | 7 | Uh-scaf40-2 | 11 | Mp-scaf29-1 | 5 | |||||
| 8 | 1 | Ss-scaf14-4 | 7 | Sr-chr20-5 | 7 | Um-chr05-3 | 7 | Uh-scaf36-1 | 3 | Mp-scaf34-1 | 3 | ||||
| 2 | Ss-scaf46-1 | 8 | Sr-chr07-4 | 10 | Um-chr07-2 | 5 | Uh-scaf43-1 | 4 | |||||||
| 9 | 1 | Ss-scaf44-4 | 4 | Sr-chr05-2 | 8 | Um-chr05-4 | 4 | ||||||||
| 10 | 1 | Ss-scaf45-1 | 9 | Sr-chr21-1 | 7 | Um-chr21-2 | 10 | Um-scaf09-1 | 9 | Mp-scaf37-1 | 10 | ||||
| 11 | 1 | Pf-scaf22-1 | 26 | ||||||||||||
| 2 | Pf-scaf01-8 | 3 | |||||||||||||
| 12 | 1 | Pf-scaf15-1 | 16 | ||||||||||||
| 13 | 1 | Mg-scaf17_1-1 | 3 | ||||||||||||
| 2 | Mg-scaf1_1-2 | 4 | |||||||||||||
| 3 | Mg-scaf8_1-1 | 8 | |||||||||||||
| 4 | Mg-scaf8_1-2 | 3 | |||||||||||||
| 14 | 1 | Mg-scaf1-2-2 | 4 | ||||||||||||
| 15 | 1 | Mg-scaf3_1-1 | 4 | ||||||||||||
NOTE.—Species are displayed column-wise, with the cluster nomenclature and their corresponding size. Clusters on the same row are inferred to be orthologous and belong to the same subfamily. Clusters grouped in the same family but on distinct rows are paralogous.