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. 2016 Feb 17;8(3):622–634. doi: 10.1093/gbe/evw033

Table 1.

Measures of Genome Complexity among 27 Geraniales Species

Species LCBs-p Gene Order DR Tandem CDR Intron IG dN CP dS CP
F. sonchifolia 0 0 36 19 33 132 283 0.039 0.35
Melianthus villosus 2 0 44 15 37 150 299 0.041 0.37
H. bilobata 12 11 88 55 73 158 292 0.065 0.43
P. nanum 5 3 99 47 109 152 331 0.086 0.50
P. citronellum 5 3 84 40 108 153 336 0.087 0.50
P. echinatum 5 3 71 33 110 155 326 0.088 0.50
P. incrassatum 5 3 125 56 106 152 339 0.088 0.50
P. fulgidum 5 3 116 43 108 151 340 0.087 0.50
P. cotyledonis 6 4 87 28 106 156 337 0.087 0.50
P. australe 6 4 90 42 105 155 338 0.086 0.50
P. dichondrifolium 7 4 105 42 104 154 330 0.087 0.50
P. exstipulatum 6 4 120 47 106 159 342 0.087 0.50
P. myrrhifolium 8 4 79 31 115 154 332 0.091 0.50
P. tetragonum 7 3 72 27 115 158 329 0.090 0.50
P. transvaalense 12 8 490 41 107 156 324 0.087 0.50
P. x hortorum 11 12 171 25 120 156 325 0.093 0.51
M. emarginata 9 13 191 58 123 169 333 0.088 0.52
M. marlothii 12 14 160 85 117 173 336 0.085 0.50
G. maderense 13 17 196 38 114 171 310 0.081 0.52
G. phaeum 11 10 378 64 120 174 364 0.079 0.51
G. incanum 14 11 752 107 122 175 364 0.078 0.50
C. macrophylla 3 4 58 40 79 165 311 0.071 0.49
E. texanum 12 12 132 27 110 180 300 0.083 0.52
E. chrysanthum 15 11 122 33 110 185 326 0.094 0.62
E. gruinum 14 9 72 35 111 166 319 0.093 0.62
E. foetidum 4 3 58 46 88 172 306 0.076 0.50
E. trifolium 6 5 60 35 95 170 320 0.077 0.51

Note.—Measures of genome complexity that were highly correlated to other complexity measures are not shown (supplementary tables S3 and S4, Supplementary Material online). F, Francoa; H, Hypseocharis; P, Pelargonium; M, Monsonia; G, Geranium; C, California; E, Erodium. LCBs-p, inversion distance estimated from local collinear blocks; Gene order, inversion distance estimated from gene order; DR, small dispersal repeats; Tandem, repeats estimated from Tandem Repeat Finder (Benson 1999); CDR, indels in coding and rRNA regions; IG, indels in intergenic regions; Intron, indels in intron regions.