Table 2. Kd values (μM) for binding of ATF1, c-Jun, c-Fos and AP-1 TFs to different CRE consensus sequences.
Oligo # | BS | ATF1 | c-Jun | c-Fos | c-Fos/c-Jun |
---|---|---|---|---|---|
1 | CRE | 0.04 | 1.3 | - | 0.19 |
2 | CRE | 0.03 | 2.4 | - | 0.15 |
3 | AP-1 | 11 | 2.5 | - | 0.27 |
4 | AP-1 | 17 | - | - | 0.50 |
5 | HS | 0.17 | - | - | 3.5 |
6 | HS | 0.04 | - | - | 4.0 |
7 | Mutant | - | - | - | - |
Results were fitted using nonlinear least square minimization. QPID's sensitivity is limited to 50 μM for quantitative affinity measurement. Weaker interactions were marked as ‘-’.