Table 1.
List of adapters and primers used during HELP-tagging library preparation
Name | Sequence (5′-3′) |
---|---|
AE | 5′-AcagtaatacgactcactatagggagaaggctCAAGCAGAAGACGGCATACGACAGCAG (AE_1) |
5′-p-CGCTGCTGTCGTATGCCGTCTTCTGCTTGagccttctccctatagtgagtcgtattactg*T (*T=Inverted-dT) (AE_2_Int_dT) | |
AS1 | HT Adapter F 5′- ACACTCTTTCCCTACACGACGCTCTTCCGATCTTATGACG*T |
HT Adapter R 5′- pCGTCATAAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT | |
AS2 | HT Adapter F 5′- ACACTCTTTCCCTACACGACGCTCTTCCGATCTACATCTC*T |
HT Adapter R 5′- pGAGATGTAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT | |
AS3 | HT Adapter F 5′- ACACTCTTTCCCTACACGACGCTCTTCCGATCTCGGTACA*T |
HT Adapter R 5′- pTGTACCGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT | |
AS4 | HT Adapter F 5′- ACACTCTTTCCCTACACGACGCTCTTCCGATCTGTCATGA*T |
HT Adapter R 5′- pTCATGACAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT | |
PS | AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT |
PE | CAAGCAGAAGACGGCATACGACAGCAG |