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. 2016 Jan 26;48(4):257–273. doi: 10.1152/physiolgenomics.00046.2015

Table 1.

List of adapters and primers used during HELP-tagging library preparation

Name Sequence (5′-3′)
AE 5′-AcagtaatacgactcactatagggagaaggctCAAGCAGAAGACGGCATACGACAGCAG (AE_1)
5′-p-CGCTGCTGTCGTATGCCGTCTTCTGCTTGagccttctccctatagtgagtcgtattactg*T (*T=Inverted-dT) (AE_2_Int_dT)
AS1 HT Adapter F 5′- ACACTCTTTCCCTACACGACGCTCTTCCGATCTTATGACG*T
HT Adapter R 5′- pCGTCATAAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
AS2 HT Adapter F 5′- ACACTCTTTCCCTACACGACGCTCTTCCGATCTACATCTC*T
HT Adapter R 5′- pGAGATGTAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
AS3 HT Adapter F 5′- ACACTCTTTCCCTACACGACGCTCTTCCGATCTCGGTACA*T
HT Adapter R 5′- pTGTACCGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
AS4 HT Adapter F 5′- ACACTCTTTCCCTACACGACGCTCTTCCGATCTGTCATGA*T
HT Adapter R 5′- pTCATGACAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
PS AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
PE CAAGCAGAAGACGGCATACGACAGCAG