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. 2016 Feb 11;8(3):665–680. doi: 10.1093/gbe/evw019

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© The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Fig. 4.— — The numbers of DEGs among strains within (A) Symbiodinium minutum and (B) Symbiodinium psygmophilum. Counts are placed on the lines connecting the two strains being contrasted. Line thickness is scaled by the number of DEGs. Counts below the diagram show the total number of genes differentially expressed in at least one strain and the total number of comparable genes (ORFs) across all strains. (C) Distances between pairs of strains based on Euclidean distance (×10³) of expression estimates for all pairwise comparisons of S. minutum and S. psygmophilum strains. Boxes are shaded such that light coloration reflects relatively small values and dark coloration reflects relatively large values.