Table III. Twenty most stably expressed genes across all 321 wheat samples.
Ensembl Transcript Identifier | Mean Expression Level (tpm) | Coefficient of Variation (%) | Putative Functiona |
---|---|---|---|
Traes_1DS_18F13A3DD.1 | 13 | 33 | RING zinc finger domain superfamily protein |
Traes_5AS_019ECA143.1b | 13 | 33 | Ion channel |
Traes_7BL_46880A4FE.1 | 8 | 33 | Ser/Thr protein kinase |
Traes_6DS_4092ABCFB.1 | 7 | 34 | Uncharacterized protein |
Traes_6DS_BE8B5E56D.1b | 24 | 34 | Ser/Thr protein kinase |
Traes_6AS_90A5682D3.1 | 21 | 34 | Ser/Thr protein kinase |
Traes_1AL_968B97E50.1b | 15 | 34 | ATP-dependent zinc metalloprotease FTSH8 |
Traes_2AS_C407071E4.2 | 9 | 34 | WRKY family transcription factor family protein |
Traes_4BS_F96B8575F.1 | 6 | 34 | Uncharacterized protein |
Traes_4DL_A3860F7BD.1 | 9 | 35 | DEAD box ATP-dependent RNA helicase38 |
Traes_1BL_0CB993ADF.2 | 10 | 35 | VHS and GAT domain-containing protein |
Traes_7DL_DAC78932E.1 | 9 | 35 | DGCR14-related |
Traes_7DL_21CCF6E42.2 | 9 | 35 | GCIP-interacting family protein |
TRAES3BF019300030CFD_t1 | 14 | 35 | Uncharacterized protein |
Traes_1BL_5FFF3DBA5.1 | 15 | 35 | Ubiquitin family protein |
Traes_5DL_4A0A6443E.1 | 12 | 35 | Uncharacterized protein |
Traes_4AL_8CEA69D2E.1b | 31 | 35 | Ubiquitin-conjugating enzyme |
Traes_7AL_EA6F4FFDE.2 | 13 | 35 | Zinc finger protein |
Traes_4BS_4AD56C4F8.2b | 13 | 36 | Uncharacterized protein |
Traes_5BL_6E4024365.1 | 9 | 36 | Gal oxidase/Kelch repeat superfamily protein |
For genes that were not annotated in wheat, putative functions were assigned by orthology to rice, maize, and Arabidopsis genes according to EnsemblPlants.
Gene stability tested by qPCR.