Table 3. Molecular Evolutionary Analysis of Lc-GFDPS.
| Branch-Site Model | Parameters | LnL | Pdf=1 | Positive Selected Sitesa | ||||
|---|---|---|---|---|---|---|---|---|
| Null | Site class | ω0 | ω1 | ω2a | ω2b | −13624.6953 | ||
| Proportion | 0.78662 | 0.04379 | 0.16064 | 0.00894 | ||||
| Background | 0.06289 | 1.00000 | 0.06289 | 1.00000 | ||||
| Foreground | 0.06289 | 1.00000 | 1.00000 | 1.00000 | ||||
| Alternative | Site class | ω0 | ω1 | ω2a | ω2b | −13618.1028 | P < 0.001 | 108 L (0.981*) |
| Proportion | 0.88027 | 0.04712 | 0.06892 | 0.00369 | 137 A (1.000**) | |||
| Background | 0.06257 | 1.00000 | 0.06257 | 1.00000 | 202 K (0.955*) | |||
| Foreground | 0.06257 | 1.00000 | 999.00000 | 999.00000 | 321 L (0.968*) | |||
*
Posterior probabilities calculated by Bayes Empirical Bayes analysis. LnL, Log likelihoods.
a
The amino acids and their positions refer to those of GFDPS.