Table 2.
Differentially expressed genes (DEG) in the Δppk2 compared to the WT in the log and stationary phases. Genes with log2 fold change >1 .5 or <1 .5 with a p-value ≤0 .05 were considered significant. Genes of unknown and after functions those that encode hypothetical proteins were not included in this table.
| Δppk2 DEG (Log phase) | Log2 fold | Proposed Function (Abbreviation) |
|---|---|---|
| CJJ81176_RS02990 | −1.73 | Phosphate ABC transporter substrate-binding protein |
| CJJ81176_RS06675 | −1.72 | Catalase (KatA) |
| CJJ81176_RS03985 | −1.70 | CoA-binding protein |
| CJJ81176_RS00395 | −4.18 | Cation-binding protein |
| CJJ81176_RS01080 | −2.42 | Serine protease |
| CJJ81176_RS02935 | 1.53 | Sulfurase |
| CJJ81176_RS03255 | 1.60 | C4-dicarboxylate ABC transporter (DcuB) |
| CJJ81176_RS04170 | 1.70 | Arylsulfate sulfotransferase |
| CJJ81176_RS03005 | 1.96 | Phosphate import ATP-binding protein (PstB) |
| DEG (Stationary phase) | ||
| CJJ81176_RS04335 | -1.56444 | Alanine racemase |
| CJJ81176_RS04100 | 1.528314 | Membrane protein |
| CJJ81176_RS02320 | 1.575105 | Preprotein translocase subunit (SecE) |
| CJJ81176_RS08175 | 1.593406 | 50S ribosomal protein L14 (RplN) |
| CJJ81176_RS05955 | 1.867396 | CopG family transcriptional regulator |
| CJJ81176_RS07160 | 1.886767 | Membrane protein |
| CJJ81176_RS05845 | 1.997799 | Membrane protein |
| CJJ81176_RS03005 | 2.149801 | Phosphate import ATP-binding protein (PstB) |