Table 3.
Genome Statistics
| Attribute | Value | % of Total |
|---|---|---|
| Genome size (bp) | 2,337,177 | 100.0 |
| DNA coding (bp) | 1,998,286. | 85.5 |
| DNA G + C (bp) | 1,235,198 | 52.9 |
| DNA scaffolds | 1 | |
| Total genesa | 2,148 | 100.0 |
| Protein coding genesa | 2,101 | 97.8 |
| RNA genes | 61 | 2.83 |
| Pseudo genes | 47 | 2.2 |
| Genes in internal clusters | NA | NA |
| Genes with function prediction | 1,578 | 73.5 |
| Genes assigned to COGs | 1,629 | 75.8 |
| Genes with Pfam domains | 1,682 | 80,1 |
| Genes with signal peptides | 158 | 7.36 |
| Genes with transmembrane helices | 605 | 28.8 |
| CRISPR repeats | NA | NA |
aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome